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- Data sets and feature names are converted into safe names such as Dataset1 and Feature1 for use inside of feature selection and classification functions. ClasifyResult class gains a featuresInfo slot which stores original identifiers as well as sanitised ones. - elasticNetPreval defunct parameter set removed.Dario Strbenac authored on 12/07/2022 14:35:03 |
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Double colons used for DataFrame function so classification works when parallelised on Windows. - Missing usage section restored by adding @rdname to all of the non-class S4 methods.Dario Strbenac authored on 11/03/2022 07:08:44 |
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Repair of Roxygen documentation completed. No warnings or errors (from functions I wrote).Dario Strbenac authored on 10/03/2022 11:45:30 |
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-Improvements to sparsediscrim's DLDA code to better handle leave-one-out cross-validation. - Major progress repairing Roxygen documentation and its flawed creation by Rd2roxygen. - Some renaming of ClassifyResult accessors to make it clearer what they do from the function name.Dario Strbenac authored on 10/03/2022 05:40:56 |
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More harmonisation of code and documentation to new expectations for function paramters and matrices.Dario Strbenac authored on 01/03/2022 05:55:10 |
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Remaining examples changed to have samples in rows and features in columns.Dario Strbenac authored on 25/02/2022 06:10:03 |
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More code harmonisation. Fixing errors in the examples in progress.Dario Strbenac authored on 25/02/2022 05:53:03 |
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- All examples updated to have matrix data as samples in rows and features in columns. - Some additional functions had code such as apply margins or colMeans changed for the new scheme. - Functions like subtractFromLocation and runTest updated to no longer use a full matrix with training and testing indices but separate training and testing data variables. Testing to do soon. - Additional minor corrections to parameter documentation.Dario Strbenac authored on 16/02/2022 06:09:25 |
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- Function interface design generalised for dependent variables that are either categorical or Surv class or column(s) representing them. - runTest parameters more intuitive if being user by a person rather than runTests. - All mention of clinical data removed in favour of sample information. - Numerous copy-paste mistakes in documentation rectified.Dario Strbenac authored on 11/02/2022 05:26:13 |
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Renamed interface files to make it easier to sort filesEllis Patrick authored on 17/01/2022 22:57:13 |