% Generated by roxygen2: do not edit by hand % Please edit documentation in R/dataset_chart_classes.R \name{feature_boxplot} \alias{feature_boxplot} \title{Feature boxplot} \usage{ feature_boxplot( label_outliers = TRUE, feature_to_plot, factor_name, show_counts = TRUE, style = "boxplot", jitter = FALSE, fill = FALSE, ... ) } \arguments{ \item{label_outliers}{(logical) Label outliers. Allowed values are limited to the following: \itemize{ \item{\code{"TRUE"}: The index for outlier samples is included on the plot.}\item{\code{"FALSE"}: No labels are displayed.}} The default is \code{TRUE}.\cr} \item{feature_to_plot}{(character, numeric, integer) The column name of the plotted feature.} \item{factor_name}{(character) The name of a sample-meta column to use.} \item{show_counts}{(logical) Show counts. Allowed values are limited to the following: \itemize{ \item{\code{"TRUE"}: The number of samples for each box is displayed.}\item{\code{"FALSE"}: The number of samples for each box is not displayed.}} The default is \code{TRUE}.\cr} \item{style}{(character) Plot style. Allowed values are limited to the following: \itemize{ \item{\code{"boxplot"}: Boxplot style.}\item{\code{"violin"}: Violon plot style.}} The default is \code{"boxplot"}.} \item{jitter}{(logical) Include points plotted with added jitter. The default is \code{FALSE}.\cr} \item{fill}{(logical) Block fill the boxes or violins with the group colour. The default is \code{FALSE}.\cr} \item{...}{Additional slots and values passed to \code{struct_class}.} } \value{ A \code{ feature_boxplot } object. This object has no \code{output} slots. See \code{\link[struct]{chart_plot}} in the \code{struct} package to plot this chart object. } \description{ A boxplot to visualise the distribution of values within a feature. } \section{Inheritance}{ A \code{feature_boxplot} object inherits the following \code{struct} classes: \cr\cr \verb{[feature_boxplot]} >> \verb{[chart]} >> \verb{[struct_class]} } \examples{ M = feature_boxplot( label_outliers = FALSE, feature_to_plot = "V1", factor_name = "V1", show_counts = FALSE, style = "boxplot", jitter = FALSE, fill = FALSE) D = MTBLS79_DatasetExperiment C = feature_boxplot(factor_name='Species',feature_to_plot='Petal.Width') chart_plot(C,D) }