% Generated by roxygen2: do not edit by hand % Please edit documentation in R/PLSDA_charts.R \name{plsda_roc_plot} \alias{plsda_roc_plot} \title{PLSDA ROC plot} \usage{ plsda_roc_plot(factor_name, ycol = 1, ...) } \arguments{ \item{factor_name}{(character) The name of a sample-meta column to use.} \item{ycol}{(character, numeric, integer) The column of the Y block to be plotted. The default is \code{1}.\cr} \item{...}{Additional slots and values passed to \code{struct_class}.} } \value{ A \code{ plsda_roc_plot } object. This object has no \code{output} slots. See \code{\link[struct]{chart_plot}} in the \code{struct} package to plot this chart object. } \description{ A Receiver Operator Characteristic (ROC) plot for PLSDA models computed by adjusting the threshold for assigning group labels from PLS predictions. } \details{ This object makes use of functionality from the following packages:\itemize{ \item{\code{pls}} \item{\code{ggplot2}}} } \section{Inheritance}{ A \code{plsda_roc_plot} object inherits the following \code{struct} classes: \cr\cr \verb{[plsda_roc_plot]} >> \verb{[chart]} >> \verb{[struct_class]} } \examples{ M = plsda_roc_plot( factor_name = "V1", ycol = 1) D = iris_DatasetExperiment() M = mean_centre()+PLSDA(factor_name='Species') M = model_apply(M,D) C = plsda_roc_plot(factor_name='Species') chart_plot(C,M[2]) } \references{ Liland K, Mevik B, Wehrens R (2023). \emph{pls: Partial Least Squares and Principal Component Regression}. R package version 2.8-3, \url{https://CRAN.R-project.org/package=pls}. Wickham H (2016). \emph{ggplot2: Elegant Graphics for Data Analysis}. Springer-Verlag New York. ISBN 978-3-319-24277-4, \url{https://ggplot2.tidyverse.org}. }