Commits · 7.x-3.x · project / nd_genotypes · GitLab

Mar 26, 2020
- Switch small typo. · beded1fb
  Lacey Sanderson authored Mar 26, 2020
  
  View commits for tag 7.x-3.2 7.x-3.2
  beded1fb
- Merge branch '7.x-3.x' of https://github.com/UofS-Pulse-Binfo/nd_genotypes into 7.x-3.x · b50aedac
  Lacey Sanderson authored Mar 26, 2020
  
  b50aedac
- Add genotype matrix use case. · e1402e0c
  Lacey Sanderson authored Mar 26, 2020
  
  e1402e0c
- Update README.md · 346584de
  Lacey-Anne Sanderson authored Mar 26, 2020
  
  346584de
- Update storage specification. · 1c282bee
  Lacey Sanderson authored Mar 26, 2020
  
  1c282bee
- Change test to match api: now use N for any nucleotide rather then failing. · e481522f
  Lacey Sanderson authored Mar 26, 2020
  
  e481522f
- Update and clarify installation instructions. · c2e5a0a5
  Lacey Sanderson authored Mar 26, 2020
  
  c2e5a0a5
- Ensure marked-up sequence appears on variant pages. · f0abd907
  Lacey Sanderson authored Mar 26, 2020
  
  f0abd907
- Marked-up Sequence: Handle IUPAC code N and multiple variants in the same position. · 90080922
  Lacey Sanderson authored Mar 26, 2020
  
  90080922
Mar 25, 2020
- Remove accidentally added library. · cf55de90
  Lacey Sanderson authored Mar 25, 2020
  
  cf55de90
- Merge pull request #46 from UofS-Pulse-Binfo/more-test-coverage · 3aff8ac1
  Lacey-Anne Sanderson authored Mar 25, 2020
  3aff8ac1
- Bug fixes to the genotype matrix. · ec0a44a5
  Lacey Sanderson authored Mar 25, 2020
  
  ec0a44a5
- Merge pull request #45 from UofS-Pulse-Binfo/more-test-coverage · 1a9a11a6
  Lacey-Anne Sanderson authored Mar 25, 2020
  1a9a11a6
- Switch field addition to accession check. · 5ccb48c2
  Lacey Sanderson authored Mar 25, 2020
  
  5ccb48c2
- Debugging for Travis. · 7f0ed96a
  Lacey Sanderson authored Mar 25, 2020
  
  7f0ed96a
- Fix bug where so__genetic_markker was not auto-attached. · 68de48f9
  Lacey Sanderson authored Mar 25, 2020
  
  68de48f9
- Now genus is a little too long. · a7d2d685
  Lacey Sanderson authored Mar 25, 2020
  
  a7d2d685
- Ensure summary mview is populated. · 44afa8cc
  Lacey Sanderson authored Mar 25, 2020
  
  44afa8cc
- Add addtl tests for include files and fix api by making organism more unique. · f06b3207
  Lacey Sanderson authored Mar 25, 2020
  
  f06b3207
Mar 24, 2020
- Merge pull request #44 from UofS-Pulse-Binfo/more-test-coverage · eab8326b
  Lacey-Anne Sanderson authored Mar 24, 2020
  eab8326b
- Move table creating outside tests for travis. · 0105281f
  Lacey Sanderson authored Mar 24, 2020
  
  0105281f
- Move table creating outside tests for travis. · cc0d707b
  Lacey Sanderson authored Mar 24, 2020
  
  cc0d707b
- Use encrypted token for travis. · 0fc46eee
  Lacey Sanderson authored Mar 24, 2020
  
  0fc46eee
- Use encrypted token for travis. · caa4d74e
  Lacey Sanderson authored Mar 24, 2020
  
  caa4d74e
- Ensure partition tables are created for Travis. · 70f03826
  Lacey Sanderson authored Mar 24, 2020
  
  70f03826
Mar 23, 2020
- Added some defaults. · 2d7c0ebe
  Lacey Sanderson authored Mar 23, 2020
  
  2d7c0ebe
- Added testing for genotype matrix download. · 3cdec32c
  Lacey Sanderson authored Mar 23, 2020
  
  3cdec32c
- Add genotype matrix form testing. · bc45b553
  Lacey Sanderson authored Mar 23, 2020
  
  bc45b553
Mar 20, 2020
- Test form build and validate. · 75bfc266
  Lacey Sanderson authored Mar 20, 2020
  
  75bfc266
- Merge pull request #43 from UofS-Pulse-Binfo/32-matrix-filtering · ed8dfe49
  Lacey-Anne Sanderson authored Mar 20, 2020
  ed8dfe49
- remove debugging commands. · 8613ad9f
  Lacey Sanderson authored Mar 20, 2020
  
  8613ad9f
- Fix tests. · 325c3d5c
  Lacey Sanderson authored Mar 20, 2020
  
  325c3d5c
Mar 10, 2020
- Cycle through all filter criteria combinations. · 5c999969
  Lacey Sanderson authored Mar 10, 2020
  
  5c999969
Mar 09, 2020
- Use variant_of for seeders. · 8846bbc2
  Lacey Sanderson authored Mar 09, 2020
  
  8846bbc2
- Adding debugging info for Travis. · 721bf193
  Lacey Sanderson authored Mar 09, 2020
  
  721bf193
- Ensure we use the default feature relationship for the module. · c7bc8798
  Lacey Sanderson authored Mar 09, 2020
  
  c7bc8798
- Ensire tripalus mviews are created before running the test. · 8bfa4b5e
  Lacey Sanderson authored Mar 09, 2020
  
  8bfa4b5e
Mar 08, 2020
- Fix partition in dataset seeder. · 034a364c
  Lacey Sanderson authored Mar 08, 2020
  
  034a364c
Mar 07, 2020
- Add tests for filter criteria individually. · 911e66cb
  Lacey Sanderson authored Mar 07, 2020
  
  911e66cb
- Tests for the unfiltered query (genotype matrix. · b3208cae
  Lacey Sanderson authored Mar 06, 2020
  
  b3208cae