Search Results for "gui linux"
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Showing 54 open source projects for "gui linux"
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Cloud tools for web scraping and data extractionAutomate web data collection with cloud tools that handle anti-bot measures, browser rendering, and data transformation out of the box. Extract content from any website, push to vector databases for RAG workflows, or pipe directly into your apps via API. Schedule runs, set up webhooks, and connect to your existing stack. Free tier available, then scale as you need to.
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UnBBayes
Framework & GUI for Bayes Nets and other probabilistic models.
UnBBayes is a probabilistic network framework written in Java. It has both a GUI and an API with inference, sampling, learning and evaluation. It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy. -
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Java multiprecision calculator
Multiprecision calculator
Multipresicion calculator, based on Bigdecimal Java class . It has a library (BigMath) that makes calculations with Bigdecimal. It has also an expression parser to parse the user input. It allows you to store user defined variables and functions . You can operate with them to be used for calculations or for creating new functions with composition. With the new version, you can also calculate the derivative of a function. JDK-17 compatibility -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting... -
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OpenChrom is a tool for gas chromatography and mass spectrometry. The focus is to handle data files from different GC/MS and GC/FID systems and vendors. Its functionality and algorithms can be extended using a flexible plugin approach, based on Eclipse RCP.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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DockoMatic is a GUI application that is intended to ease and automate the creation and management of AutoDock jobs for high throughput screening of ligand/receptor interactions.
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CSV Comparator
CSV Comparator is a tool for comparing files which contain CSV-Data.
CSV Comparator is a tool for comparing files which contain CSV-Data. It was created for performance engineers to be able to have a easy way to compare data from two testruns and be able to automate the comparing process of various files with scripts. There is a command line tool as well as a user interface. In case you need to compare .xml-Files you can convert them to .csv-Files with my other project CSV Transformer. The advantages by using CSV as input and output are the... -
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Assists users to analyse and select players in Australian Football League (AFL) based football fantasy competitions. Displayed in a Java Swing GUI, users can sort and filter players based on many statistical categories.
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bel_fft
FFT co-processor in Verilog based on the KISS FFT
bel_fft is a FFT co-processor that can calculate FFTs with arbitrary radix. It is a hardware implementation of the free software Kiss FFT ("Keep it simple, Stupid!"). The target was to allow a simple replacement of the software code with the hardware implementation. Therefore bel_fft comes with a software driver that is compatible with the Kiss FFT routines. bel_fft also has a modular architecture and allows interfacing different bus architectures. So far AMBA AXI, Altera's Avalon bus and... -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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...The present release features GPU accelerated versions of all the background subtraction methods and morphological post processing of the object blobs with dilation and erosion filters, implemented in OpenCL. The framework was mainly designed as a toolkit for the rapid development of interactive art projects that explore dynamics of complex environments. The Scene GUI runs and compiles under Windows, Linux, and MacOS X, and is available in both 32 bit and 64 bit versions.
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JEXTools
Java software/gui for databasing/batch processing experimental data
This is the official binary download site. The official site for bug tracking and the code repository is at www.github.com/jaywarrick/JEX -
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Deem
Analyze time-course data with significance tests, clustering, modeling
Use statistical methods to analyze time-course data (gene expression microarray and RNA-seq data in particular, but not limited to). Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional... -
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Japrosim is a java library for both discrete event and continuous simulation. GUI for modeling and automatic code generation are offered. An explanation module is integrated. Models are described in XML and owl for interoperability.
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AJT is a set of utility classes for Java for handling some bioinformatics data, graphics file export, GUI widgets, and classes that should long have been added to the official Java API.
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FishingCNV
Copy number variation (CNV) detection in exome sequencing data
FishingCNV, a software tool developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs. The program comes in 2 different releases * GUI version (FishingCNV_X.X.X.zip) * Command line version (FishingCNV_X.X_pipeline) Browse through our files to find the different releases. -
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MatrixMaker
Custom substitution matrix creator
Create custom substitution matrices for BLAST protein search. Easy to use GUI based application. -
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Seqshell
A JAVA GUI for performing the function of Tophat and Cuffdiff
Combines the Tophat and Cuffdiff functions in one GUI interface. tophat and cuffdiff are required to be pre-installed in the system. By modifying the program, it can be used to execute any command line programs even R packages since R can also be run from commandlines. New functions: Batch processing function for Tophat. You can now execute as many mapping jobs as you want with tophat. This program will save the output into separate folders. An alert email will be sent to your email... -
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mesoFON
mesoFON is an individual-based mangrove forest model, a KiWi extension
mesoFON is an individual-based mangrove forest model. It is a Java implementation of the KiWi model done with RePast Simphony. It contains several new features: (1) You can add up to 10 species via the GUI. However, in principle, the number of species to be included programmatically is unlimited. (2) You can use a variety of growth functions via typing them in as a string on the GUI. (3) The model is transparent, sinc it comes with the Eclipse workbench of RePast. -
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CUO
Codon Usage Optimizer
CUO is a GUI-based multiplatform software written in Java. It is open source and built with a user/developer-friendly structure. The main function of the software at the current development stage is to optimize genes to be transformed into the Chlamydomonas reinhardtii chloroplast genome although it can be used to optimize genes into other hosts as well. The main tool in CUO, Moptimizer, introduces a semi-automatic way of gene optimization which provides more flexibility and accuracy during... -
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Simuquant
A quantum circuit simulator written in Scala
Simuquant is made to construct and simulate universal quantum circuits. It's GUI enables intuitive access and direct graphical feedback, making it useful in a classroom situation and the like. Simulation processing is done in parallel, utilizing parallel collections introduced in scala 2.9. This application has been created as part a bachelor-thesis at the Hamburg University of Applied Sciences. The thesis is available... -
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PetriNetExec: Java Embeddable Petri Nets
PetriNetExec a library for embedding Petri Nets into Java applications
Briefly said, PetriNetExec is an open-source Java library which allows you to embed Petri Nets into your Java application. Using PetriNetExec you can define places and transitions, connect them using arcs and inhibitors, define the initial marking and then fire events and see how tokens flow into the network. * PetriNetExec does not provide a GUI for editing the network nor will it provide in the near future. That is not really a feature :-) but to those of you able to cope with this... -
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A cross platform GUI for several code formatter, beautifier and indenter like AStyle, GNU Indent, GreatCode, HTML Tidy, Uncrustify and many more. Main feature is a live preview to directly see how the selected formatting option affects the source code.
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SGI allows to define and interpret most of undeterministic 2D shape grammars. It supports real-time subshape detection and labeled rules. GUI is designed for easy manipulation with shape grammars: creation of shapes, rules and generation of designs.
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Fits and scores vertices from models onto reference vertices to find its polyhedral identity and symmetry quantitatively. Java based with GUI
