Open Source Python Scientific/Engineering Software for Mac

niftilib is a collection of i/o routines for the nifti1 neuroimage data format. C (nifticlib), Java (niftijlib), Matlab (niftimatlib), and Python (pynifti) code is available. For nifti format info see: http://nifti.nimh.nih.gov/

Libre Mechanics it’s an Open Knowledge project created to offer a useful platform of information related with the development and research of Mechanical Engineering themes and similar fields, higly related with the use of Open Source and Software Libre tools. Here you will find a wide variety of projects, publications and scientific material available as references for developing their own projects, also guides and tutorials that allow you to take advantage of free software tools available today. The four principal lines of work are: Design Analysis and Simulation Automation and Robotics Development

ART is a flexible simulation framework for wind instruments. It includes a growing library of modelling elements. So far bore discontinuities, branches, tone holes, cylindrical and conical tubes, Bessel horns and bent tubes are available for frequency domain modelling. In the time domain generic bidirectional propagation elements, scattering elements, fractional delays, convolution with reflection functions and general z-domain networks are available and can be described using MuParserX expressions. Cylindrical and conical ducts can also be defined based on their geometry. Available models and their parameters can be enumerated and combined to form simulators for complex acoustical structures. Parameters can be specified symbolically by expressions containing other parameter values or global variables. Dependencies between parameters are resolved at run time. However, MuParserX expressions are compiled at design time. Zero-delay loops are detected and reported.

This project is for maintaining a linux system that concentrates on math, logic, and geometry related softwares.

An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). For more details refer to documentation link below.

The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.

The Simple Medical Imaging Library Interface (SMILI), pronounced 'smilie', is an open-source, light-weight and easy-to-use medical imaging viewer and library for all major operating systems. The main sMILX application features for viewing n-D images, vector images, DICOMs, anonymizing, shape analysis and models/surfaces with easy drag and drop functions. It also features a number of standard processing algorithms for smoothing, thresholding, masking etc. images and models, both with graphical user interfaces and/or via the command-line. See our YouTube channel for tutorial videos via the homepage. The applications are all built out of a uniform user-interface framework that provides a very high level (Qt) interface to powerful image processing and scientific visualisation algorithms from the Insight Toolkit (ITK) and Visualisation Toolkit (VTK). The framework allows one to build stand-alone medical imaging applications quickly and easily.

ThanCad is a 2dimensional cad, with limited 3d support and raster inclusion capability and emphasis in engineering. It is being written in Python and since it uses the Tkinter library, it is platform independent.

Dowser is a research tool for the web. It clusters results from search engines, associates words that appear in previous searches, and keeps a local cache of all the results you click on in a searchable database. It helps you keep track of what you find.

PROJECT HAS MOVED! ROS is now hosted at https://code.ros.org/gf/project/ros/

Object oriented reusable software classes designed to be used to construct larger software projects developed in multiple software languages.

pyBallistics is a graphical small arms ballistics program used to calculate ballistic coefficients, and model bullet trajectories. Future improvements will be a reloading database, and web links to industry reloading data.

JLink lets users author flow charts based on ISO 5807 and IBM standards. Developers can use JLink to add flowcharts to applications, serve a flow chart over the web in PDF or PNG, or dynamically create a flowchart with Javascript, Python or Ruby scripts

Mathpad is a command line utility. It will later have a GUI, but not at this time.

MaxFem is an open software package for electromagnetic simulation by using finite element methods. The package can solve problems in electrostatics, direct current, magnetostatics and eddy-currents. Since version 0.4.0, MaxFEM requires Python 3. We have moved the installers to the MaxFEM website (see below). In order to improve MaxFEM, we will require you to fill out a simple form before downloading them.

Febrl (Freely Extensible Biomedical Record Linkage) does data standardisation (segmentation and cleaning) and probabilistic record linkage ("fuzzy" matching) of one or more files or data sources which do not share a unique record key or identifier.

This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.

This C++ lib is used and created to provide easy methods based on ROOT (a CERN data analysis framework). It was developed for use in practical courses but is not limited to. In addition it is ported step by step into Python.

A cross-platform aplication to explore online free maps (OpenStreetMap). Build with python and pygame, full immersive environnement. Actually only source code, require pygame.

PyTectonics is no longer maintained. There is a replacement, which you can see here: davidson16807.github.io/tectonics.js.

A web-based system for upoading, managing, sharing, and analyzing bioinformatic data. The system is primarily written in python, and runs on both linux and MacOs.

The Modular System for Shelves and Coasts (MOSSCO) is a coupling framework for Earth System Models. It helps users to integrate their own numerical models with other developments. Quick Start: git clone git://git.code.sf.net/p/mossco/setups mossco-setups git clone git://git.code.sf.net/p/mossco/code mossco-code cd mossco-code cat QuickStart.md or read online https://sf.net/p/mossco/code/ci/master/tree/QuickStart.md Beware: this is alpha software, expect trouble! ------------------------- Better, read the full documentation online http://www.mossco.de/doc or make it yourself make doc acroread doc/mossco_documentation.pdf ---------------------- Why MOSSCO? MOSSCO, the "Modular System for Shelves and Coasts" is a framework for coupling processes or domains that are originally developed in standalone numerical models. The software MOSSCO implements this infrastructure in the form of a library of components and couplers, and of example coupled application.

A Python package extending NumPy and SciPy to allow specification of numbers and arrays with physical units.

The Python Control Systems Library, python-control, is a python module that implements basic operations for analysis and design of feedback control systems. This homepage for this project is at http://python-control.org and the code base in maintained at https://github.com/python-control/python-control. Information on this page is out of date, but left here for posterity.

Metropolis is a visualization tool for TRANSIMS traffic simulation output. It specializes in viewing the dynamic outputs of the micro-simulator, such as vehicle motion and other time-varying data.