BALIGN

Multi-functional batch sequence aligner incorporating Needleman-Wunsch, Smith-Waterman and Oommen-Kashyap algorithms along with compound alignment of secondary sequences.

Features

Global sequence alignment using Needleman-Wunsch algorithm
Local sequence alignment using Smith-Waterman algorithm
Transition probability computation using Oommen-Kashyap algorithm
Compound alignment of sequence pairs
Batch processing

Project Activity

See All Activity >

License

GNU General Public License version 2.0 (GPLv2)

Follow BALIGN

BALIGN Web Site

Other Useful Business Software

MyQ Print Management Software

SAVE TIME WITH PERSONALIZED PRINT SOLUTIONS

Boost your digital or traditional workplace with MyQ’s secure print and scan solutions that respect your time and help you focus on what you do best.

Learn More

Rate This Project

User Reviews

Be the first to post a review of BALIGN!

Additional Project Details

Languages

English

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Eiffel

Related Categories

Eiffel Bio-Informatics Software

Registered

2008-04-09

Similar Business Software

MEGA

MEGA (Molecular Evolutionary Genetics Analysis) is a powerful and user-friendly software suite designed for analyzing DNA and protein sequence data from species and populations. It facilitates both automatic and manual sequence alignment, phylogenetic tree inference, and evolutionary hypothesis...

See Software
Geneious

Geneious Prime makes bioinformatics accessible by transforming raw data into visualizations that make sequence analysis intuitive and user-friendly. Simple sequence assembly and easy editing of contigs. Automatic annotation for gene prediction, motifs, translation, and variant calling. Genotype...

See Software
Galaxy

Galaxy is an open source, web-based platform for data-intensive biomedical research. If you are new to Galaxy start here or consult our help resources. You can install your own Galaxy by following the tutorial and choosing from thousands of tools from the tool shed. This instance of Galaxy is...

See Software
Genome Analysis Toolkit (GATK)

Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size. The GATK...

See Software
BioTuring Browser

Explore hundreds of curated single-cell transcriptome datasets, along with your own data, through interactive visualizations and analytics. The software also supports multimodal omics, CITE-seq, TCR-seq, and spatial transcriptomic. Interactively explore the world's largest single-cell expression...

See Software
Illumina DRAGEN Secondary Analysis

The Illumina DRAGEN Secondary Analysis provides accurate, comprehensive, and efficient analysis of next-generation sequencing data. Graph reference genome and machine learning driving unprecedented accuracy. Provides ultra-efficient workflow; can fully process a 34x whole human genome in ~30...

See Software