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数据处理from pyteomics import mzmlimport numpy as npimport pandas as pdimport matplotlibimport matplotlib.pyplot as pltimport jsonimport csvimport osimport mathdef change_mzML(fd): for spect...

我在网上也看过一些关于该算法的python代码，有的复杂度过大，有的写的过于繁琐。于是我决定自己动手写一个。以下是实现过程。（关于算法的原理，本文不提及）4.1 Smith-Waterman implementationWrite Python program to conduct the classical Smith-Waterman algorithm and illustrate us...

GO Programming Exercise网上有一些关于GOATOOLS包的使用，但感觉跨度有点大，对一些生物信息学刚入门的同学很不利，我特意贴了一些案例，给同学们参考。重点理解在于，我们应将goterm看成一种数据类型，并在obo_parser.py文件查找对应的使用方法。我写的案例十分简单，希望能带来一些帮助。案例来源：https://link.springer.com/conten...

Lab 4: Phylogenetic Reinference Using Maximum Likelihood[！TOC]Learning ObjectivesAfter this lab, you willGrasp the underlying theory of maximum likelihood approach for phylogenetic inferenceKnow...

OutlineRNA-Seq experimental designTranscript quantification, and normalizationDifferential expression analysisPathway anaysisRNA-Seq assemblyAlternative splicing analysisTranscriptome profili...