论文阅读：Unsupervised Gene-Cell Collective Representation Learning with Optimal Transport (AAAI-24)

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已于 2024-04-30 16:37:40 修改 · 864 阅读

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于 2024-04-30 16:35:51 首次发布

Yu, J., Chen, N., Gao, M., Li, X., & Wong, K.-C. . (2024). Unsupervised Gene-Cell Collective Representation Learning with Optimal Transport. Proceedings of the AAAI Conference on Artificial Intelligence, 38(1), 356-364. https://doi.org/10.1609/aaai.v38i1.27789

Unsupervised Gene-Cell Collective Representation Learning with Optimal Transport | Proceedings of the AAAI Conference on Artificial Intelligence

这篇论文和论文阅读：ZINB-Based Graph Embedding Autoencoder for Single-Cell RNA-Seq Interpretations-CSDN博客以及论文阅读：Unsupervised Deep Embedded Fusion Representation of Single-Cell Transcriptomics (AAAI-23)-CSDN博客

有共同作者，研究方向一致，可以一起学习一下。

摘要

细胞类型识别在单细胞RNA测序（scRNA-seq）数据分析中起着至关重要的作用。尽管已经提出了许多用于聚类scRNA-seq数据的深度嵌入方法，但它们仍然未能揭示细胞和基因的内在特性。本文提出了一种新颖的端到端深度图聚类模型，scGCOT（a novel end-to-end deep graph clustering model for single-cell transcriptomics data based on unsupervised G