Bioconductor Systempiper

Showing : systempiper • reset

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1.4k

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systemPipeRdata systempipeR

3.3 years ago appropiate • 0

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736

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systemPipeRdata systemPipeR

3.3 years ago appropiate • 0

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1.2k

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systemPipeR

updated 3.5 years ago by dcassol ▴ 100 • written 3.5 years ago by Bioinformatics ▴ 30

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3.9k

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systemPipeR Bioconductor DiffBind BiocGenerics

updated 4.4 years ago by Martin Morgan 25k • written 4.4 years ago by tina • 0

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965

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predORF systemPipeR ORF prediction

6.2 years ago Mr.RB ▴ 20

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4.6k

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systempiper

6.6 years ago Deleted ▴ 70

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runCommandline systemPipeR bash

6.7 years ago rj.innet • 0

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1.5k

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systemPipeR rnaseq

6.8 years ago rj.innet • 0

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928

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systempiper

6.9 years ago kimberly.dickson • 0

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2.2k

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systempiper edger rna-seq

updated 7.2 years ago by Aaron Lun ★ 28k • written 7.2 years ago by clarisbaby • 0

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1.5k

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systempiper R batchjobs

updated 7.8 years ago by Thomas Girke ★ 1.7k • written 7.8 years ago by tarun2 • 0

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1.5k

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R edger systemPipeR

8.3 years ago xuertowong • 0

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2.6k

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R rnaseq tophat summarizeoverlaps systempiper

updated 8.6 years ago by Thomas Girke ★ 1.7k • written 8.6 years ago by abass.conteh • 0

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systempiper run_edgeR

updated 8.7 years ago by Thomas Girke ★ 1.7k • written 8.7 years ago by alexandr.gopanenko ▴ 50

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4.5k

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deseq2 systempiper Tutorial

9.0 years ago musa ▴ 10

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1.8k

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systempiper go term

9.1 years ago A Gossner ▴ 50

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2.0k

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systempiper seeFastqPlot software error ggplot2 geom_histogram

updated 9.4 years ago by Thomas Girke ★ 1.7k • written 9.4 years ago by setarosd • 0

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deseq2 systemPipeR

10.7 years ago Ugo Borello ▴ 340

18 results • Page 1 of 1

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Comment: Many transcripts missing from tx2gene created from Ensembl GTF file by Abbott • 0

Thank you so much

Comment: European Bioconductor Conference 2023 planning by net • 0

Great. I will join it. [Crazy Games][1] [1]: https://avbgames.net/crazy-games

Comment: Pre-filtering, adjusting independent filtering, or lfcthreshold() on DESeq2? Low by Alexander • 0

Hi Dr. Love, I believe I found some old forums that you had referenced earlier and used their suggestions, plus the advice given in this p…

Answer: Starting with a clean bioconductor rstudio container by ATpoint ★ 4.9k

Disclaimer: I am a mere (but daily) Docker user, by no means an expert on the internals of Docker. There is to my knowledge no caching of …

Answer: Starting with a clean bioconductor rstudio container by James W. MacDonald 68k

The help for `docker run` indicates that the `--rm` argument (as one might imagine) removes the docker container after running. I would ima…

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Answer: DESeq2 LRT: Testing Effects of Treatment1, Treatment2, and Their Interaction in

Comment: Analysis of clusters of a heatmap with enrichGO of clusterProfiler: choice fo t

Answer: Is voomByGroup available in limma?

Answer: limma duplicateCorrelation appropriate where some blocks cross condition and som

Comment: Ensembl 114 / Ensembl Genomes 61 has been released!

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