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Biochem Lab Midterm Reviewer

I. Carbohydrates are classified as monosaccharides, disaccharides, or polysaccharides. Starch and glycogen are polysaccharides that serve as long-term energy stores in plants and animals, respectively. Cellulose is a structural polysaccharide found in plant cell walls. Starch, glycogen, and cellulose can be identified using iodine solution, which turns them blue-black, reddish-brown, or amber/yellow, respectively. II. Lipids serve important roles in energy storage, as structural components of cell membranes, and as chemical messengers. Storage lipids like triglycerides are found in fat cells. Membrane lipids include phospholipids and glycolipids that

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1K views5 pages

Biochem Lab Midterm Reviewer

I. Carbohydrates are classified as monosaccharides, disaccharides, or polysaccharides. Starch and glycogen are polysaccharides that serve as long-term energy stores in plants and animals, respectively. Cellulose is a structural polysaccharide found in plant cell walls. Starch, glycogen, and cellulose can be identified using iodine solution, which turns them blue-black, reddish-brown, or amber/yellow, respectively. II. Lipids serve important roles in energy storage, as structural components of cell membranes, and as chemical messengers. Storage lipids like triglycerides are found in fat cells. Membrane lipids include phospholipids and glycolipids that

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ACM

BIOCHEM LAB MIDTERM REVIEWER - do not give (+) result in Tollen’s, Benedict’s, and
Fehling’s tests

Experiment 4: POLYSACCHARIDES - starch, cellulose, glycogen

I. Introduction (BOOK) Starch

Carbohydrates - plants

- it is a group of biochemical substances that contains - starch — plant — energy

functional groups:
- TYPES:

- Aldehydes
1. AMYLOSE

- Ketones
- straight chain glucose polymer

- Alcohols
- 15% to 20%

- most abundant class of biomolecules on Earth


- alpha (1—>4) linkage

- 3 Main Classes of Carbohydrates

- Monosaccharide
2. AMYLOPECTIN

- Disaccharide
- branched glucose polymer

- Polysaccharide
- 80% to 85%

- Note: all these 3 have differences in terms of - alpha (1—>4) linkage

their physical and chemical properties


- branched point: alpha (1—>6) linkage

Monosaccharides - storage of polysaccharides in plants

- simplest carbohydrate

- physiologically important in metabolism


Iodine Test

- GLUCOSE
- test for presence of starch

- most important form of monosaccharide


- iodine dissolved in KI = deep blue black color

- reaction is the result of the formation of


Polysaccharides polyiodide chains from the reaction of starch and
- Function as CARBOHYDRATE RESERVES
iodine

- Starch and Glycogen


- amylose/straight chain = forms helices

- Function as STRUCTURAL

- Cellulose
Starch Test

- STARCH
- a blue-black color results to starch is present

- serves as a long-term storage medium for food - HYDROLYSIS: Clear

energy in plants
- W/O HYDROLYSIS: Dark Blue

- it accumulates in seeds, tubers, and fruits

- GLYCOGEN
Carbohydrate Test

- serves as a long-term storage medium for food - IODINE TEST - presence of starch

energy in animals
- COOKED STARCH = Dark blue color (presence of
- found in liver and muscle tissues
starch)

- CELLULOSE
- RAW STARCH = Very small amount of change in
- a linear polysaccharide of B-D-glucopyranose color (Light blue)

units found in plants

- it is the principal component of the rigid cell wall Fehling’s Test + Starch

of plants
- no reaction at all

- provides structure rather than energy


- no hydrolysis

- most animals can’t digest cellulose = they lack


suitable enzymes to catalyze its hydrolysis
Starch Hydrolysis + Fehling’s Test

- Termites and Ruminant Animals (cattle, sheep, - starch will be hydrolyzed to glucose = brick red

and goat) are able to use cellulose as food = - positive result

digestive tracts contain enzymes that can break - acid and enzymatic hyrdolysis

down the linkages of cellulose

Cellulose

II. Lecture (PPT) - CHITIN: similar to cellulose in both function and


Polysaccharides
structure

- contains many monosaccharide units bonded to - linkage: beta (1—>4)

each other by GLYCOSIDIC LINKAGE


- function: rigidity to the exoskeleton pf crabs,
- POLYMERS: glucose molecules
lobsters, shrimps, insects, and other arthropods

- not sweet
- linear polymer, no branching, similar to cellulose

ACM
Iodine Test w/ Cellulose
- solubility in non-polar solvents like chloroform,
- no reaction
carbon tetrachloride

- filter paper
- insolubility in water

- important roles:

Solubility of Cellulose
- major sources of energy in animals and plants

- Cotton: 90% cellulose


- structure of cell membranes

- most indegistible

- Schweitzer’s reagent
Major Roles of Lipids in the Body
- Storage Lipids

Hydrolysis of Cellulose + Fehling’s Test


- Triglycerides, divided into two

- yields beta-D-glucose units


- fats

- positive results
- oils

- they are triesters of glycerol and fatty acids

Glycogen
- significant components of fat storage cells

- storage of carbs in animals

- highly branched
- Membrane Component Lipids

- homopolymer of alpha-D-gluccose
- usually amphipathic and complex

- ethyl alcohol: precipitating agent


- classified into two groups:

- lugol’s iodine test: REDDISH BROWN COLOR/ - phospholipids

YELLOWISH BROWN
- glycolipids

- unhydrolyzed glycogen: (-) from Fehling’s


- cell membranes are made of a lipid bilayer
- hydrolyzed glycogen: (+) from Fehling’s
consisting of phospholipids

III. Results (QUIZ) - Chemical Messengers

- Steroids: characterized by the presence of a


Raw Starch Dark Blue
fused four-ring nucleus

- most common steroid: CHOLESTEROL

Glycogen Brown/Orange-Brown
- Cholesterol: serves as a starting material for the
Heated Starch Solution Colorless formation of HORMONES AND BILE SALTS

Cellulose Amber/Yellow II. Lecture & Results (PPT)


Lipids
Hydrolyzed Starch Brick Red - “adipose” or “taba”

- compounds that consist of mostly of non-polar


groups

- Hydrolysis: the breakdown of starch in glucose


- w/ limited solubility in water, but dissolve freely in
- Cellulose: “Dietary Fiber”
organic solvent

- Unhydrolyzed Starch: No breakdown of molecules

- Polymers: Polysaccharides that contain glucose Structure & Solubility


molecules
- salt and carbohydrates (hydrophilic)

- Filter Paper: Medium to test cellulose


- lipids: big molecule

- Starch: Found in plants for energy storage


- cannot bond w/ hydrogen

- Iodine: Serves as an indicator for starch


- can bond w/ carbohydrates

- Glycogen: Most common polymer in humans and


animals

- Sodium Hydroxide: Reagent used for neutralization Fatty Acids (building blocks of lipids)
of sulphuric acid
- SATURATED

- Smooth: Treated filter paper


- all C-C bonds are single bonds

- UNSATURATED

Experiment 5: LIPIDS - monounsaturated: one C=C bonds

- polyunsaturated: 2 or more C=C bonds present


I. Introduction (BOOK) up to 6 double bonds are present in fatty acids

Lipids
- naturally occuring substances
Simple Triacylglycerol
- grouped together on the basis of their:
- single bond

ACM
Solubility of Fats & Oils
Mixed Triacylglycerol - sparingly soluble in water but are solube in non-
- double bond
polar organic solvent

Fats & Oils SOLVENT SOLUBILITY SOLUBILITY


- Fats: solid
OF OILS OF BUTTER
- Oils: liquid

Ether miscible soluble


- naturally occuring mixed TRIACYLGLYCEROL

- same general chemical structure


Chloroform miscible soluble
- main difference: PHYSICAL STATE

Alcohol imissicible insoluble


Difference Bet. Fats & Oils
- PHYSICAL STATE
Water imissicible insoluble
- FATS

- predominantly saturated
6N Acid imissicible insoluble
- solids/semisolids @ room temp.

- predominantly obtained from animals


6N Base imissicible insoluble
- tasteless, odorless, colorless

- principle: “LIKE DISSOLVES LIKE”

- OILS

- predominantly unsaturated
Test for Chemical Properties
- liquids @ room temp.
- reaction w/ alcoholic iodine: HALOGENATION
- obtained from plants & fishoils (omega)
REACTION

- odorless, colorless
- determine unsaturated glyceride

- halogen readily reacts with unsaturated glyceride


Physical Determination of Fats & Oils by ADDITION REACTION

- Spotting Effect: practical test for lipids

- Unglazed Paper: opaque (light scattering)


SAMPLE VISIBLE INTERPRETATI
RESULTS ON
SAMPLE SPOTTING EFFECT
Slight change
less
Butter (+) Coconut Oil to a lighter
unsaturated
color
Oil (+)
Color change
Alcohol (—) Linseed/ is lighter than more
Cottonseed Oil that w/ unsaturated
Ether (—) coconut oil
- Coconut Oil: palmitic, lauric, myristic

- Conclusion in Parchment Paper


- Cottonseed Oil: palmitic, oleic, linoleic

- when applied to unglazed paper, it leaves a - these two undergone heat to be converted into oil

parchment translucent spot through w/c


light can pass
- Canola Oil: 6% saturated

- due to the fact that they evaporate much - Coconut Oil: 92% saturated

more slowly than water bcoz the forces that


hold the lipid molecules together are Good Fats vs Bad Fats
stronger, so the spot remains
- studies indicate that TYPE of dietary fat and
- ALCOHOLS
amount of dietary fat are important for balanced
- other substances temporarily coat the diet:

paper and do not leave the paper - current recommended amounts are = total
permanently translucent
fat intake in calories:

- easily evaporate; weak forces that hold - 15% monounsaturated fat

them/ spot will dry up


- 10% polyunsaturated fat

- PAPER FIBERS: shrink


- < 10% saturated fats

- SPOT: disappear
- studies also indicate that:

- Saturated Fats: bad

- Monounsaturated Fats: good

ACM
- Trans- mono- unsaturated Fats: bad
- organic molecules - building blocks/monomers of
- Polyunsaturated Fats: good/bad
PROTEINS

- omega 3 and 6: good (ESSENTIAL) = tuna/ - STRUCTURE:

salmon
- acidic functional grp: Carboxyl Group (-
COOH)

Saponifications (Soap) - Basic Amino Group (—NH2)

- triglycerides and saponifiable lipids


- Organic R Group or side chain that
- saponifiable lipids are those that can be determines amino acid chemical structure &
hydrolyzed to under basic conditions to form fatty properties

acid salts (SOAP)


- GENERAL STRUCTURE OF AMINO ACID:

- hydrolyzed = naburn fats

- a positive test is indicated by:

- formation of bubbles w/c indicate that a


soap was formed

Effects of MgCl2 on Water


- hard water is WATER that has high MINERAL - there are 20 naturally occuring amino acids

content than SOFT WATER


- at their ISOELECTRIC POINT (pl) or at its
- hard water has high concentrations of Ca2+ and NEUTRAL pH state they exist as ZWITTERIONS
Mg2+ ions
rather than as unionized molecules

- hardness of water is often indicated by the non- - except for GLYCINE; all amino acids are optically
formation of froth when SOAP/TOOTHPASTE is active due to the presence of an ASYMMETRIC
agitated in the water sample
a-Carbon atom.

- all naturally occuring proteins are in an L-amino


Detection of Cholesterol in Food Extracts acid configurations

- SALKOWSKI TEST
- D-amino acids: present in bacterial cell wall &
- when conc. sulfuric acid is added to a antibiotics.

chloroform sol’n of cholesterol, the


chloroform layer shows a RED TO BLUE II. Lecture & Results (PPT)
COLOR
Roles of Amino Acids
- intermediate in metabolism

- LIBERMANN-BURCHARD TEST
- storage & transport of nutrients

- qualitative test for lipids

- test for presence of cholesterol


Amino Acids
- EMERALD GREEN COLOR: (+) result
- Organic Compound/Molecules

- pink, lilac
- serves as the building block or the
- upper layer become RED
monomers of proteins

- results are quite sensitive to the presence of - Amine and Carboxyl

water, keep everything dry


- —NH2 and —COOH

- variable results: coconut oil- green color


Solubility Test
- lard: gives brown color

- color change is gradual, 1st it appears as Tryptophan Miscible Immisicible


PINK coloration, changes to LILAC & finally C

to deep green after.


Tyrosine Miscible Immisicible
H

Arginine Miscible L
Immisicible
O

Experiment 6: QUALITATIVE ANALYSIS OF AMINO Methionine Miscible R


Immisicible
ACIDS O

Proline Miscible F
Immisicible
I. Introduction (BOOK) O

Amino Acids Histidine Miscible R


Immisicible
- our body is made up of amino acids
M

- plays an important role as intermediates in Unknown A Miscible Immisicible


metabolism especially in the STORAGE &
Unknown B Miscible Immisicible
TRANSPORT OF NUTRIENTS.

ACM
SUMMARY
Qualitative Test
1. Ninhydrin Test TEST RESULT INTERPRETATION
- a-amino acid typically give a BLUE OR PURPLE
Ninhydrin Blue/Yellow Alpha Amino Acid
COLOR

(Blue)

- used for visualization of FINGERPRINTS

Imino Acid (Yellow)


2. Xanthoproteic Acid Xanthoproteic Orange Aromatic Amino
- a method used to determine the amount of Acid
protein soluble in a solution, using a concentrated
NITRIC ACID
Millons Reddish Color (+) Phenol
- (+) result in Amino Acids (ORANGE) carrying cintaining
aromatic groups, especially in the presence of compound
Tyrosine

Histidine Blue/Viloet (+) Histidine


3. Millon’s Test
Sakaguchi Red Mono-substituted
- detect the presence of soluble proteins

guanidine/amino
- a REDDISH-BROWN coloration or precipitation
acid
indicates the presence of TYROSINE residue
which occur in nearly all proteins
Hopkins Cole Purple Ring (+) Tryptophan

4. Histidine Test Folin’s Reddish (+) Methionine


- discovered by KNOOP

- bromination of histidine in acid solution

- heating of alkaline solution develops a BLUE OR


VIOLET COLORATION

5. Sakaguchi Test
- under alkaline, a-naphthol (1-hydroxy
naphthalene) reacts with a mono-substituted
guanidine compound like arginine which upon
treatment with hypobromite or hypochlorite
produces a RED COLOR

- PRESENCE OF MONO-SUBSTITUTED
GUANIDINE CONTAINING AMINO ACID

6. Adamkiewics-Hopkins Test/AcreeRosen Heim


Test
- specific test for TRYPTOPHAN

- the tryptophan reacts with glyoxilic avcid in the


presence of sulphuric acid to give a PURPLE
COLORED product

- colored purple product: HOPKINS COLE TEST

- GLYOXILIC ACID IS PREPARED FROM GLACIAL


ACETIC ACID

7. Folin’s McCarthy Sullivan Test


- reaction also forms the basis for the quantitative
determination of METHIONINE

- PROLINE & HYDROXYPROLINE CONDENSE


WITH ISATIN (ISATIN=ISA)

- REAGENT UNDER ALKALINE CONDITION TO


YIELD BLUE SOLUTION

- SODIUM + METHIONINE + ACID = RED


SOLUTION

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