Histopath Worksheet
Histopath Worksheet
LABORATORY
WORKSHEET IN
HISTOPATHOLOGY
Types of Hazards
• Chemical hazard
• Physical hazard
• Biological hazard
• Electrical hazard
• Sharps hazard
• Fire hazard
• Radioactive hazard
CHEMICAL HAZARDS
• Potential harm or injury comes from misuse and mishandling of chemicals.
• May cause fire, irritations, allergic reactions
Examples:
Cleaning agents/disinfectants
Reagents
Drugs
Gases
PRECAUTIONS:
1. Use of proper PPE
2. Proper hand hygiene (immediately after exposure)
3. Always CHECK THE LABELS.
• Name of chemical
• Expiration date
• Hazard warnings and safety procedures
4. Proper storage and usage
• Chemicals must be placed below countertop height.
• Never mix chemicals.
• Use of fume hood
PHYSICAL HAZARDS
• Mostly are self-accidents.
• Includes ergonomic hazards of lifting, pulling, pushing, and repetitive tasks.
• Improper postures for a long period
• Improper way of lifting heavy objects
• Other unnoticed are electrical, mechanical, thermal, and acoustic that ignoring these may
soon cause serious consequences.
Other examples:
• Slippery floor
• Running
• Unstable objects
• Heavy objects
• Broken glassware, slides, sharps
• Dangling jewelries
• Long hair
BIOLOGICAL HAZARDS
• Anything that cause disease to humans
• Includes infectious agents, toxins, specimens, contaminated solutions or objects
• Always treat human samples as potentially biohazardous
Examples:
• Blood/tubes
• HIV
• HbsAg
• Urine and other body fluids
• Aerosols, droplets
• Sputum
• M.tuberculosis
• Stool
• Parasites and ova
• Fresh tissues
ELECTRICAL HAZARD
• Can result from faulty electrical equipment or wiring, or improper use of cords or
extensions.
• May cause fire, shock, explosions, electrocution.
• Life-threatening but can easily be avoided.
Precautions
• Do not touch or operate electrical equipment, or wiring if your hands are wet.
• Wet equipment should be unplugged and should be allowed to dry completely before
reusing
• Equipment must also be unplugged before cleaning.
• Overloaded circuits must be reported
When electrical shock occurs
• Do not touch the person with bare hands
• Turn off the circuit breaker, unplugging the equipment or cord
• Moving the equipment or the person must be done using nonconductive materials such as
glass or wood
• Victim should receive immediate medical attention
• Cardiopulmonary resuscitation (CPR) if necessary
Other Hazards:
FIRE HAZARDS
• Flammable liquids or gasses
• Electrical appliances, equipment, exposed wirings
• Combustible Chemicals
Must remember:
When a fire is discovered, all employees are expected to take the actions in the acronym RACE:
Rescue—rescue anyone in immediate danger
Alarm—activate the institutional fire alarm system
Contain—close all doors to potentially affected areas
Extinguish/Evacuate—Attempt to extinguish the fire, if possible or evacuate, closing the door
• Familiarize yourselves with the fire exits and fire extinguisher locations
NOTE:
NOT ALL TYPES OF FIRES CAN BE EXTINGUISHED BY WATER!
CONCEPTS OF PATHOLOGY
Etiology- origin
Disease process
Morphological changes
Clinical significance
DIVISIONS OF PATHOLOGY
Gross and Microscopic Pathology
Anatomical Pathology (Autopsy)
Clinical Pathology (CM, CC, Hematology, Microbiology, Blood Bank)
CELL DEATH
• Necrosis- changes produced by enzymatic digestion
- More on environmental factors that trigger the release of enzymes
• Apoptosis- programmed cell death
- Method of the body that blocks potential cancer cells.
INFLAMMATION- “-itis"
Consists of :
1. Vascular response
2. Migration of cells
3. Activation of leukocytes
4. Systemic reactions
It is a protective response of the body to remove the initial cause of injury and its consequences
or products
Terminated when the inciting agent is eliminated, and the mediators are degenerated.
2 types of fluids:
i. Exudate- such as pus. Fluid with cells, proteins, solid materials that leaks into the tissue.
ii. Transudate- fluid the leaks into the tissue due to systemic conditions.
Granulomatous inflammation
-a pattern of chronic inflammation
-characterized by formation of granuloma which forms lumps
Seen in:
Tuberculosis
Leprosy
Syphilis
Schistosomiasis
• Leukemia/lymphoma
Epithelial cells:
• Adenocarcinoma
• Squamous cell carcinoma
TYPES OF BIOPSIES
What is a Biopsy?
Bio- means life
Psy- to see, appearance
A process of excision or examination of tissue samples coming from a living person.
The gold standard in diagnosing malignant disease.
Types of biopsies
• Fine needle aspiration biopsy (FNAB)- least invasive, only uses the smallest needle to
aspirate cells from the area of abnormality.
• Core needle biopsy- removes not only cells but also a small amount of surrounding tissue.
• Punch biopsy- used for obtaining diagnostic full-thickness of skin specimens. The
procedure uses a circular blade that is rotated down to epidermis, dermis, and into the
subcutaneous fats forming a 3-4mm cylindrical core of skin tissue sample.
• Cutaneous biopsy- also used for skin biopsy. For diagnosing melanoma
• Shave biopsy- usually done in the skin. Fragments are “shaved” from the surface.
Tissue samples usually come in the laboratory in fixative such as formalin or sometimes they
arrive fresh and must be immediately fixed.
They arrive in the lab together with the patient’s basic information, clinical history, sample
description, and site of origin.
Where “23” is for the year, the procedure was done, and 0001 is for the specimen number.
3. Smear preparation
- The general rule is smears are made by spreading a portion of the specimen over the surface
of the slide using a platinum loop.
- Alternatively making a smear using a second slide to obtain a uniform distribution of
secretion or sample.
Three ways of Smear preparation:
Streaking- Using an applicator stick or platinum loop, the sample (body fluid) is
rapidly and gently applied in a direct or zigzag line throughout the slide.
Spreading- a selected portion of a sample is transferred to a clean slide teasing the
mucous strands apart with an applicator stick. More tedious than streaking.
Commonly done with sputum, mucoid secretions, and bronchial aspirates.
Pull-apart- done by dropping a sample into a clean slide and facing it to another slide
allowing to first to disperse evenly in both slides. Pulling both slides in opposite
directions.
4. Touch preparation
- Smear preparation whereby the surface of a freshly cut tissue is brought into contact and
pressed on the surface of a clean glass slide allowing cells to be transferred into the slide.
NAME: ______________________________________________________________________________
YEAR AND SECTION: _________________________________
GROUP NUMBER: ____________________________________
CONTACT NUMBER: __________________________________
GROUP PHOTO
NAMES OF GROUPMATES:
SELF PHOTO
GROSS EXAMINATION
Type of specimen: __________________
Size of specimen: (in centimeter)
o Length: ______________
o Width: _______________
o Thickness: ___________
Consistency: _______________________
Shape: ____________________________
Color: ____________________________
PICTURES/DOCUMENTATION
Picture of Specimen: Gross appearance
Rate the student’s performance by putting a number in the appropriate box using the following
criteria:
CRITERIA RATING
Set up and equipment care
Following instructions
Proper examination of specimen
Safety
Clean up
Comment/s:____________________________________________________________________
______________________________________________________________________________
______________________________________________________________________________
3. Smear preparation
- The general rule is smears are made by spreading a portion of the specimen over the surface
of the slide using a platinum loop. Alternatively, make a smear using a second slide to
obtain a uniform distribution of secretion or sample. Too-thin or too-thick smears have to
be avoided. This is useful for preparing smears of thick secretions such as serous fluids,
sputum, enzymatic lavage, from the gastrointestinal tract, and blood smears. This is
particularly useful in cytological examinations, particularly cancer diagnosis.
Three ways of Smear preparation:
Streaking- Using an applicator stick or platinum loop, the sample (body fluid) is
rapidly and gently applied in a direct or zigzag line throughout the slide, attempting
to obtain a uniform distribution of secretions. Avoid too thick or too thin smears.
Spreading- a selected portion of a sample is transferred to a clean slide teasing the
mucous strands apart with an applicator stick. More tedious than streaking.
Commonly done with sputum, mucoid secretions, and bronchial aspirates.
Pull-apart- done by dropping a sample into a clean slide and facing it to another slide
allowing to first to disperse evenly in both slides. Pulling both slides in opposite
directions.
4. Touch preparation
- Smear preparation whereby the surface of a freshly cut tissue is brought into contact and
pressed on the surface of a clean glass slide allowing cells to be transferred into the slide
and examined using Phase Contrast microscopy or stained using light microscopy.
PICTURES/DOCUMENTATION
Rate the student’s performance by putting a number in the appropriate box using the following
criteria:
CRITERIA RATING
Set up and equipment care
Following instructions
Proper examination of specimen
Safety
Clean up
Comment/s:____________________________________________________________________
______________________________________________________________________________
______________________________________________________________________________
MATERIALS
• Fresh tissue specimen
• Tissue cassette
• Formalin
• Beaker
• 70% alcohol
• 90% alcohol
• 100% alcohol
• Xylene
• Paraffin wax
• Paper box as mold
• Personal protective equipment
PROCEDURE
Fixation
The specimen is placed in a liquid fixing agent (fixative) such as formaldehyde solution (formalin)
in a 1:20 ratio. This will slowly penetrate the tissue causing chemical and physical changes that
will harden and preserve the tissue and protect it against subsequent processing steps. There are a
limited number of reagents that can be used for fixation as they must possess particular properties
that make them suitable for this purpose. For example, tissue components must retain some
chemical reactivity so that specific staining techniques can be applied subsequently. Formalin,
usually as a phosphate-buffered solution, is the most popular fixative for preserving tissues that
will be processed to prepare paraffin sections. Ideally, specimens should remain in fixative for
long enough for the fixative to penetrate into every part of the tissue and then for an additional
period to allow the chemical reactions of fixation to reach equilibrium (fixation time). Generally,
this will mean that the specimen should be fixed for between 6 and 24 hours. Most laboratories
will use a fixative step as the first station on their processor. Following fixation, the specimens
may require further dissection to select appropriate areas for examination. Specimens that are to
be processed will be placed in suitably labeled cassettes (small, perforated baskets) to segregate
them from other specimens. The duration of the processing schedule used to process the specimens
will depend on the type and dimensions of the largest and smallest specimens, the particular
processor employed, the solvents chosen, the solvent temperatures, and other factors. The
following example is based on a six-hour schedule suitable for use on a Leica Peloris™ rapid tissue
processor.
Dehydration
Because melted paraffin wax is hydrophobic (immiscible with water), most of the water in a
specimen must be removed before it can be infiltrated with wax. This process is commonly carried
out by immersing specimens in a series of ethanol (alcohol) solutions of increasing concentration
until pure, water-free alcohol is reached. Ethanol is miscible with water in all proportions so that
the water in the specimen is progressively replaced by the alcohol. A series of increasing
concentrations is used to avoid excessive distortion of the tissue.
A typical dehydration sequence for specimens not more than 4mm thick would be:
1. 70% ethanol 15 min
2. 90% ethanol 15 min
3. 100% ethanol 15 min
4. 100% ethanol 15 min
5. 100% ethanol 30 min
6. 100% ethanol 45 min
At this point all but a tiny residue of tightly bound (molecular) water should have been removed
from the specimen.
Clearing
Unfortunately, although the tissue is now essentially water-free, we still cannot infiltrate it with
wax because wax and ethanol are largely immiscible. We therefore have to use an intermediate
solvent that is fully miscible with both ethanol and paraffin wax. This solvent will displace the
ethanol in the tissue, then this in turn will be displaced by molten paraffin wax. This stage in the
process is called “clearing” and the reagent used is called a “clearing agent”. The term “clearing”
was chosen because many (but not all) clearing agents impart an optical clarity or transparency to
the tissue due to their relatively high refractive index. Another important role of the clearing agent
is to remove a substantial amount of fat from the tissue which otherwise presents a barrier to wax
infiltration.
A popular clearing agent is xylene and multiple changes are required to completely displace
ethanol.
A typical clearing sequence for specimens not more than 4mm thick would be:
1. xylene 20 min
2. xylene 20 min
3. xylene 45 min
Wax infiltration/Impregnation
The tissue can now be infiltrated with a suitable histological wax. Although many different
reagents have been evaluated and used for this purpose over many years, the paraffin wax-based
histological waxes are the most popular. A typical wax is liquid at 60°C and can be infiltrated into
tissue at this temperature then allowed to cool to 20°C where it solidifies to a consistency that
allows sections to be consistently cut. These waxes are mixtures of purified paraffin wax and
various additives that may include resins such as styrene or polyethylene. It should be appreciated
that these wax formulations have very particular physical properties which allow tissues infiltrated
with the wax to be sectioned at a thickness down to at least 2 µm, to form ribbons as the sections
are cut on the microtome, and to retain sufficient elasticity to flatten fully during flotation on a
warm water bath.
A typical infiltration sequence for specimens not more than 4mm thick would be:
1. wax 30 min
2. wax 30 min
3. wax 45 min
Embedding or Blocking
Now that the specimen is thoroughly infiltrated with wax, it must now be formed into a “block”
which can be clamped into a microtome for section cutting. This step is carried out using an
“embedding centre” where a mould is filled with molten wax and the specimen placed into it. The
specimen is very carefully orientated in the mould because its placement will determine the “plane
of section”, an important consideration in both diagnostic and research histology. A cassette is
placed on top of the mould, topped up with more wax and the whole thing is placed on a cold plate
to solidify. When this is completed, the block with its attached cassette can be removed from the
mould and is ready for microtomy. It should be noted that, if tissue processing is properly carried
out, the wax blocks containing the tissue specimens are very stable and represent an important
source of archival material.
PICTURES/DOCUMENTATION
Rate the student’s performance by putting a number in the appropriate box using the following
criteria:
CRITERIA RATING
Set up and equipment care
Following instructions
Preparation of sample
Safety
Clean up
Comment/s:____________________________________________________________________
______________________________________________________________________________
______________________________________________________________________________
OBJECTIVES
• At the end of this activity, students are expected to be able to demonstrate how to use the
microtome with safety and proper precaution.
• To be able to know the parts and functions of a microtome.
• To be able to know and demonstrate the histopathologic steps in preparation of tissue slide
from microtomy, staining, to mounting.
PROCEDURE
Trimming
Trimming is a process by which the technologist removes the excess wax of the tissue block.
After the tissues are embedded and the wax has solidified, the block is removed from the mold,
accession number is noted, the excess wax is cut off from the block to expose the tissue surface in
preparation for actual cutting. Trim the sides, top and bottom of the tissue block until perfect level
is achieved and all sides are parallel, almost to the edge of the tissue. Care should be taken to avoid
removing too much tissue.
Section-cutting (Microtomy)
Once the tissues have been embedded, they must be cut into sections thin enough to be placed on
a slide. This is done with a microtome. Good microtomy techniques are the one that minimizes the
artifacts on a tissue block for better staining and later on, for better tissue diagnosis.
After removing excess wax surrounding the tissue blocks, proceed with section-cutting with the
following procedure:
1. Clamp the tissue block onto the block holder.
2. Set the angle of the knife to 0-15°
3. Advance the block into the knife with continued cutting until complete sections (ribbons)
come out of the block while a regular cutting rhythm is maintained.
9. Label the slide with the accession number using diamond pencil.
Staining
Staining is the process whereby the tissue components are made visible in microscopic sections by
direct interaction with a dye or stating solution. Cells’ and/or tissues’ different affinities to dyes
produce contrast so morphological changes are more easily identified as well as the characteristics
and structural relationships of tissues for the evaluation and the establishment of the presence or
absence of a disease.
Mounting
Mounting is the last step in tissue processing that results in a permanent histological preparation
suitable for microscopy, after adhesion to the slide of the sections and appropriate staining of the
tissue. Mounting improves the light refraction between glass slides and the tissue so that little,
microscopic details can be appreciated therefore sections are impregnated with a transparent
medium that has an index of refraction close to that of the glass and the tissue. The mounting
medium bonds the specimen, slide and coverslip together with a clear durable film.
Mounting procedure:
1. Dip the slide one last time with xylene and wipe the excess off from the back of the slide
and from around the section.
2. Drop a mounting medium at the center of the slide.
3. Place a clean, dry coverslip on the edge of the slide, gradually inclined downward until it
touches the mounting medium.
4. Gently press it on to the slide while the mounting medium quickly spreads though the
whole area of the section.
Excessive mounting medium should be wiped out using a cloth with xylene.
PICTURES/DOCUMENTATION
Rate the student’s performance by putting a number in the appropriate box using the following
criteria:
CRITERIA RATING
Set up and equipment care
Following instructions
Proper use of microtome
Floatation
Staining
Mounting
Safety
Clean up
Comment/s:____________________________________________________________________
______________________________________________________________________________
______________________________________________________________________________