Bio Short Note For For Tutorial Class
Bio Short Note For For Tutorial Class
In general the bigger the difference in concentration the faster the rate of diffusion
will be.
This difference between two areas of concentration is called the concentration
gradient
Increase in temperature
Particles in a gas or a solution move more quickly.
This in turn means diffusion will take place more rapidly as the random movement of
the particles speeds up.
at higher temperatures because the particles have more kinetic energy and so move
faster.
The thickness of the membrane – a shorter distance results in faster diffusion
The surface area of the membrane – clearly if there is more membrane where diffusion
can take place, diffusion will happen faster
Mass of molecules diffusing_ Heavier molecules diffuse more slowly and the reverse is
true for lighter.
Solubility- non polar or lipid- soluble materials pass through plasma membrane more
easily than polar materials.
Many important substances can move across your cell membranes by diffusion.
Example
o Oxygen_ from the air into your lungs into your blood and then into your body
cells by diffusion.
o Waste carbon dioxide produced by your cells passes out easily by diffusion.
o Simple sugars like glucose and amino acids from the breakdown of proteins in
your gut can also pass through your cell membranes by diffusion.
Adaptation of cells to make diffusion easier and more rapid across plasma membrane
Increase the surface area of the cell membrane over which diffusion occurs_ means there
is more room for diffusion to take place.
o This is done by infolding up the membrane of a cell the area over which diffusion
can take place.
o Tissues and organs show similar adaptations to make sure that diffusion takes
place as quickly as possible –
Example
o The air sacs of the lungs,
o The villi of the small intestine and
o The thin, flat leaves of plants .
2. Osmosis
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Diffusion takes place where particles can spread freely from one place to another.
However, the solutions inside a cell are separated from those outside the cell by the cell
membrane, which does not let all types of particles through.
o Only the smallest particles can pass through freely.
Dilute solution of sugar contains a high concentration of water (the solvent) and a low
concentration of sugar (the solute).
A concentrated sugar solution contains a relatively low concentration of water and a
high concentration of sugar.
Osmosis is a special type of diffusion where only water moves across a partially
permeable membrane, from an area of high concentration of water to an area of lower
concentration of water.
A cell is basically a solution inside a partially permeable bag (the cell membrane).
o The cell contents contain a fairly concentrated solution of salts and sugars.
o Water moves from a high concentration of water particles (a dilute solution) to a
less concentrated solution of water particles (a concentrated solution) across the
membrane of the cell.
o The sugars and salts cannot cross the membrane it is only water that is moving
across the membrane.
When comparing the water potential of a solution to that of a cell. We could describe it as:
– Isotonic
– Hypertonic
– Hypotonic
Isotonic_
– Solution having the same water potential as the cell.
– The cell has the same water potential as its environment; hence there is no
net movement of water molecules into and out of the cell.
Hypertonic_
– Solution having a lower (more negative) water potential than the cell
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– Because of the cell has a relatively higher concentration of water, water will
leave the cell, and will shrink.
Hypotonic_
– Solution having a higher (less negative) water potential than the cell
– The extracellular fluid has higher concentration of water in the solution than
does the cell.
Osmosis in animals
If a cell uses up water in its chemical reactions, the cytoplasm becomes more
concentrated. The external solution is hypotonic and more water will immediately move
in by osmosis.
Similarly if the cytoplasm becomes too dilute because water is produced during chemical
reactions. The external solution becomes hypertonic and water will leave the cell by
osmosis, restoring the balance.
However osmosis can also cause some very serious problems in animal cells.
o If the solution outside the cell is much more dilute than the cell contents
(hypotonic) then
Water will move into the cell by osmosis, diluting the cytoplasm.
The cell will swell and may eventually burst.
o On the other hand, if the solution outside the cell is much more concentrated
than the cell contents (hypertonic) then
Water will move out of the cell by osmosis, the cytoplasm will become too
concentrated and the cell will shrivel up.
o This is why homeostasis and maintaining constant internal conditions will
important.
Osmosis in plants
So for plants it is important that the fluid surrounding the cells always has a higher
concentration of water (it is a more dilute solution of chemicals or hypotonic) than the
cytoplasm of the cells, to keep osmosis working in the right direction.
If the surrounding fluid becomes more concentrated than the contents of the plant cells
(hypertonic),
o Water will leave the cells by osmosis.
o The vacuole shrinks and the cell becomes much less rigid – it is flaccid.
o If water continues to leave the cell by osmosis, eventually the cytoplasm pulls
away from the cell walls and the cell goes into a state known as plasmolysis.
If conditions are very dry,
o The plant cannot take enough water up through the roots from the soil.
o The cells are no longer rigid and the plant wilts.
o Many of the chemical reactions slow down and so the plant survives until more
water is available.
o But only for so long – if the osmotic situation is not put right fairly quickly, most
plants will die.
Active transport
There are three main ways in which substances are moved into and out of cells.
o Diffusion is the passive movement of substances and it depends on a
concentration gradient in the right direction to work.
o Osmosis depends on a concentration gradient of water and a partially permeable
membrane. Only water moves in osmosis.
o Active transport allows cells to move substances from an area of low
concentration to an area of high concentration, completely against the
concentration gradient.
The only way you can do this is to use energy produced by respiration.
The process is known as active transport.
o In other words, if a cell is making lots of energy, it can carry out lots of active
transport.
o Cells like root hair cells and your gut lining cells, which are involved in a lot of
active transport, usually have lots of mitochondria
Plants absorb mineral ions in the soil which usually found in very dilute solutions_ more
dilute than the solution within the plant cells.
Glucose is always moved out of your gut and kidney tubules into your blood, even when
it is against a large concentration gradient, so this relies on active transport.
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These large molecules cannot be absorbed into the bloodstream and used by your body so they need to be
broken down into smaller, simpler, soluble molecules.
The link between what comes in and what the body needs is the digestive system.
The human body needs small, soluble molecules to use in all the reactions of metabolism such as
releasing energy and making new larger molecules.
This is the main job of the digestive system – food substances are broken down into small
soluble molecules as they pass through the gut.
Large molecules that make up the carbohydrates, proteins and fats are built up from small
molecules that are joined together by condensation reactions, with a molecule of water being
lost each time.
When these large molecules are broken down during digestion it involves the opposite process –
hydrolysis (splitting with water) reactions.
Controlled by enzymes.
More about enzymes
– Biological catalysts that usually work best under very specific conditions of temperature
and pH.
– It made of protein
– Like any catalyst are not affected by the reaction they speed up, so they can be used
many times.
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1. Ingestion
The first stage in digestive system.
It is taking foodstuff into your body through the mouth.
2. Digestion
The chemical and physical breakdown of complex organic molecule that begins
in the oral cavity and extends to the small intestine.
3. Absorption
The transport of digested nutrients from the small intestine to the cell of the body
through finger like projection called villi in the small intestine.
4. Egesting
The removal of food waste from the body.
o Egestion is removal of food digestion wastes
o Excretion the process through which metabolic waste is expelled
The teeth
Your teeth, physically breaking down food and providing a greater surface area for
digestive enzymes to work on.
o This process is known as mastication.
There are 4 types of teeth
A. Incisors C. Premolar
B. Canine D. Molars
The shape of different teeth means they are ideally suited to their different functions.
The incisors and canines are used for biting while the premolars and molars are used
for chewing and crushing food
All of your teeth have a similar make-up. Parts of the teeth include:
1. Enamel
– Non-living, the hardest white outer part of the tooth
2. Dentine
– Not hard as enamel, but it is still very hard, being similar to bone.
– It is hard tissue that contains microscopic tubes
3. Pulp cavity
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– It is the center of the tooth, which contains nerves and blood vessels.
4. Cement
– Held the teeth in place.
– Keeps your teeth firmly in place and allows a certain amount of flexibility as you
are chewing.
5. Roots
– Part of the tooth that extends into the bone and holds the tooth in place.
– It makes up approximately two thirds of the tooth.
6. Crown
– The top portion of the tooth that is visible.
The saliva coated chunk of food (known as a bolus) moves to the back of your throat to be
swallowed.
◦ Swallowing is a reflex action that takes place when food reaches the back of your throat.
As you swallow, your epiglottis closes over the trachea, preventing food going down into your
lungs; you can’t swallow and breathe in at the same time.
When your food is swallowed it travels down the esophagus or gullet, squeezed along by
muscular contractions known as peristalsis.
At the lower end of the esophagus your food passes through a ring of muscle called a
sphincter into your stomach.
This sphincter
o Its contraction closes the opening to the stomach, while its relaxation allows
food to enter.
o Usually closed except when you are swallowing food, or being sick.
The stomach is a muscular bag that produces
o Protease enzymes (Pepsin) to digest protein.
o Relatively concentrated solution of hydrochloric acid.
HCL
Kills most of the bacteria that are taken in with our food.
Also helps indirectly in the breakdown of the protein in your food,
because pepsin works best in acid conditions.
o Also makes a thick layer of mucus, which protects the muscle walls from being
digested by the protease enzymes and attacked by the acid.
After a time – usually between 1-4 hours – a paste of partly digested food is squeezed out
of the stomach through another sphincter (pyloric sphincter) into the first part of the
small intestine known as the duodenum.
o pyloric sphincter- regulates the movement of food and stomach acids into the
small intestine.
As soon as it arrives the food is mixed with two more liquids: bile and enzymes.
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Bile
It neutralizes the acid from the stomach and makes the semi-digested food alkaline.
o This is ideal for the enzymes in the small intestine, which work most effectively
in an alkaline environment.
Bile also emulsifies the fats in your food – it breaks down large drops of fat into smaller
droplets.
o This provides a much bigger surface area of fats for the lipase enzymes to work on
to break down the fats completely into fatty acids and glycerol.
Enzymes
The duodenum cannot make its own enzymes, but this doesn’t matter because they are
supplied by the pancreas.
Some parts of the pancreas make the hormone insulin, which helps to control your blood
sugar levels.
The rest of the pancreas makes and stores enzymes that digest carbohydrates, proteins
and fats.
The rest of the small intestine (Jejunum and Ileum) is a long (6–8 m) coiled tube that produces
carbohydrase, protease and lipase enzymes of its own.
Absorption
Digestion end products (glucose, amino acids, fatty acids and glycerol), they leave the small intestine by
diffusion and go into the blood supply to be carried around the body to the cells that need them.
Villi_ many finger-like projections of the lining and each individual villus in turns has
micro villi to increase the surface area for diffusion.
The villi also have a rich blood supply that carries away the digested food molecules and
maintains a steep diffusion gradient.
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During absorption
The glucose molecules and amino acids go directly into the blood.
The fatty acids and glycerol move initially into the lacteals, which are part of the lymph
system.
The lymphatic fluid with its load of fatty acids and glycerol then eventually drains into
the blood as well.
Once the digested food molecules have all been taken into the blood they are taken in the
hepatic portal vein to the liver, which processes some of the food.
The remaining products of digestion are carried around the body to the cells where they
are needed.
They are built up into the molecules required by the cells. This is known as assimilation
Large intestine
◦ Portion of alimentary canal b/n the small intestine and the anus.
◦ Function absorption of water and formation of faeces (thick paste).
◦ In this wide, thin-walled tube water is absorbed back into bloodstream by
diffusion.
◦ Parts of large intestine, appendix, cecum, colon, and rectum.
◦ The appendix is a finger-shaped pouch attached to the cecum.
◦ The cecum is the first part of the large intestine. The colon is next. The rectum is
the end of the large intestine (stores stool).
◦ The time it takes to digest a meal completely will depend on a variety of things- in
particular,
◦ the size of meal you eat
◦ the type of food it contains
Issues of digestive health
Constipation
A condition in which the faces remains in your large intestine for too long, too much
water is removed from them and become compacted, hard and difficult to evacuate.
The most common causes are
Lack of fiber in the diet and
Not drinking plenty of water
It can be usually treated by:
Eating more fibre food (provide the muscle of the gut more material to
work on)
Drinking more plenty water
Sometimes taking laxatives .
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Diarrhea
If an infection causes the gut to contract more strongly or more rapidly than usual, the
faces that are produced may be very loose and watery. This is known as diarrhea.
Often this condition clears up within 24 hours, but if it persists – diarrhea can be fatal as
it causes dehydration of the tissues.
Treatment_ giving the sufferer frequent drinks of water with rehydration salts.
These replace the fluids that are being lost and keep the body tissues hydrated
until the immune system overcomes the infection.
Food hygiene
Bacteria growing on food that you eat can make you very ill and even kill you.
For example
raw meat and raw eggs can contain bacteria such as salmonella that cause
diarrhea and sickness (vomiting).
3.3 The respiratory system
◦ It has a series of incomplete rings of cartilage (shaped like the letter C) that
support it and hold it open.
◦ Your esophagus and trachea run next to each other so as a bolus (lump) of food
moves down your esophagus it presses against your trachea.
◦ The lining of your trachea secretes mucus, which like the surface of the nose
collects bacteria and dust particles.
◦ The cells that line the trachea are also covered in hair-like cilia that beat to move
the mucus with any trapped micro-organisms and dirt away from your lungs and
towards your mouth. This mucus is then either swallowed and digested or
coughed up.
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◦
The pressure inside your chest increases as the air is squeezed and forced out of
your lungs. You breathe out.
Movement of air in and out of the body is known as ventilation of the lungs
◦
large surface area,
◦
moist surfaces,
◦
short diffusion distances (gases in the air and the gases dissolved in the blood are
only separated by two cell layers, a distance of only about a thousandth of a
millimeter),
◦ a rich blood supply maintaining steep concentration gradients.
The blood that the heart pumps to the lungs has come from the active body tissues and is
◦ low in oxygen and
◦ relatively high in carbon dioxide.
Oxygen is constantly moved into the blood, but more deoxygenated blood immediately
replaces it.
What affects your breathing rate?
The average resting breathing rate for an adult human being is around 12–14 breaths per
minute. This does not use up all of the capacity of your lungs.
When you are breathing normally at rest, you take about 500 cm3 of air in and out each
time you breathe – this is only about 15% of your possible maximum.
This is known as your tidal volume of air.
The vital capacity of your lungs is the absolute maximum amount of air you can take
into or breathe out of your lungs.
Anything that increases the oxygen requirements of your body will tend to increase your
breathing rate. The main factors known to have an effect are:
Exercise
When you begin to exercise,
Your muscles start contracting harder and faster.
Muscles need more glucose and oxygen to supply their energy needs.
muscles also produce increased amounts of carbon dioxide
So during exercise, when muscular activity increases, your breathing rate
increases and you breathe more deeply.
Anxiety
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When you are anxious your body reacts as if you are in danger and need extra oxygen. As
a result, your breathing rate will increase.
Drugs
Drugs, whether they are medicines, legal or illegal, may affect your breathing rate –
sometimes fatally.
Khat, amphetamines and cocaine, for example, can cause your breathing rate to increase
dramatically, whereas depressants can cause the breathing rate to drop alarmingly and
even stop.
Environmental factors
If conditions are particularly hot, your body has to work very hard to keep cool and you
may find your breathing rate increases.
Altitude (height above sea level)
The higher you go above sea level, the lower both the atmospheric pressure and the
oxygen levels in the air.
Once you go above 3650 m above sea level, there is a noticeable lack of oxygen and your
breathing rate will increase to try and keep your oxygen levels up.
Many people feel ill at altitude although you may begin to acclimatize, getting more air
into your lungs with every breath as well as producing more red blood cells to carry
oxygen.
People who are born and live at high altitudes have an increased lung volume with many
more alveoli, as well as more blood capillaries and red blood cells to pick up the oxygen
from the air.
Weight
◦ Excess weight can also affect your breathing rate.
◦ It can be difficult to breathe deeply because of the fat around the abdominal
organs, which makes it difficult for the diaphragm to lower properly.
Smoking
◦ The effect of smoking on the lungs and the rest of the body
◦ Every cigarette smoked produces around 4000 chemicals that are inhaled into
the lungs.
◦ Nicotine is the addictive drug found in tobacco smoke.
◦ Carbon monoxide is a very poisonous gas found in cigarette smoke.
◦ It takes up some of the oxygen carrying capacity of the blood – after smoking a cigarette
up to 10% of a smoker’s blood will be carrying carbon monoxide rather than oxygen.
◦ This can lead to a shortage of oxygen for the smoker, and the effect is most marked in
pregnant women.
◦ Smoking in pregnant women can lead to
◦ premature births,
◦ low birth weight babies and
◦ Stillbirths where the baby is born dead.
Smoking-related diseases
Bronchitis (inflammation and infection of the bronchi)
◦ Tar is a sticky black chemical in tobacco smoke that is not absorbed into the
bloodstream, accumulates in the lungs, turning them from pink to grey. It makes
smokers more likely to develop bronchitis.
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In the human body we have three main types of blood vessels, arteries, veins and
capillaries; they are all carrying the same blood.
Arteries
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Carry blood away from the heart so they have to be able to withstand the pumping of the
heart forcing the blood out into the circulation.
This is usually oxygenated blood so it is bright red.
Arteries have thick walls that contain muscle and elastic fibres,
o They can stretch as the blood is forced through them and go back into shape
afterwards.
Have a pulse in them.
o The pulse is the surge of blood from the heart when it beats.
Narrower lumen (central cavity)
Because the blood in the arteries is under pressure, it is very dangerous if an artery is cut.
The only arteries that carry deoxygenated blood are:
o The pulmonary and umbilical arteries which carry the blood away from your
heart to your lungs, and away from a foetus into the placenta respectively
Veins
The veins carry blood towards your heart – it is usually low in oxygen and so is a deep
purple-red colour.
They have:
◦ much thinner walls than arteries
◦ Blood in them is under much lower pressure.
◦ Wider lumen(central cavity)
◦ They do not have a pulse, but they often have valves to prevent the back-flow of
blood as it moves from the various parts of the body back to the heart.
The only veins that carry bright red blood are
◦ Pulmonary veins, which carry oxygenated blood back from your lungs to the left-
hand side of your heart, and
◦ Umbilical vein, which carries oxygenated blood from the placenta back to the
developing fetus.
Capillaries
Link the other two types of blood vessels.
Take the blood into all the organs and tissues of the body.
It is site of the exchange of substances within the body.
Blood from the arteries passes into the capillaries
Capillaries have
Very thin walls (single cell thick) and a massive surface area.
Narrow lumen
In the same way substances produced by the cells such as carbon dioxide pass into the
blood through the walls of the capillaries and flowing back into veins to be returned to
the heart and recirculated around the body.
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◦
The right ventricle contracts and forces blood out of the heart and into the lungs
where it is oxygenated – it picks up oxygen.
◦ Oxygenated blood returns to the left-hand side of the heart from the lungs and
the left atrium fills up.
◦ The left atrium contracts forcing blood into the left ventricle.
◦ The left ventricle contracts forcing oxygenated blood out of the heart and around
the body.
Inside the heart there are many different valves. Their names describe their appearance
◦ bicuspid (two parts) –b/n left atrium and ventricle
◦ tricuspid (three parts) and – b/n right atrium and ventricle
◦ semi lunar (half-moon) -heart valve at the base of the aorta and the pulmonary
artery
The noise of the heartbeat we can hear through a stethoscope is actually the sound of
these valves transporting the surging blood.
◦ Diastole is when the heart muscles relax and it fills with blood.
◦ Systole is when the heart muscles contract and force the blood out of the heart.
At systole
◦ The blood pressure is at its highest
◦ Higher of the two readings taken.
At diastole
the pressure is lower
It is the lower reading.
A normal blood pressure is 120 mmHg/80 mmHg – usually quoted as: 120 over 80 or
120/80.
Your blood pressure will vary through the day and depending on what you are doing.
Blood pressure is used as a measure of the health of both the heart and the blood vessels.
The flexible heart
When we are resting our heart beats steadily at around 70 beats every minute.
However, during physical exercise muscles need more food and oxygen to work, and so
the heart needs to supply more blood.
It does this in two ways.
◦ The heart beats faster – the pulse rate can easily go up from rest to 120 or even 140
beats a minute.
◦ The heart can also increase the amount of blood pumped out at each heartbeat.
If people do lots of physical exercise and are fit, their heart responds by becoming bigger
and stronger.
Because their heart pumps more blood with each beat, fit people tend to have relatively
slow resting heartbeats – some are as low as 50 beats a minute.
Your heart doesn’t beat with a steady rhythm all the time – it responds to all the needs of
your body.
The blood
It is the transport medium.
Complex mixture of cells and liquid.
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It consists of a liquid called the plasma, which carries RBC, WBC and platelets and other
things like Carbon dioxide, urea
Red blood cells (RBC)/erythrocytes
One of the main components of your blood.
There are more red blood cells than any other type of blood cell.
They are superbly adapted to carrying oxygen around your body.
The RBC can do this because:
◦ they are packed with a special red substance called haemoglobin, which picks up
oxygen.
In a high concentration of oxygen, such as in the lungs, the haemoglobin reacts with
oxygen to form oxyhaemoglobin.
◦ This is bright scarlet, which is why most arterial blood is bright red.
In areas where the concentration of oxygen is lower, such as the cells and organs of the
body, the reaction reverses.
The oxyhaemoglobin splits to give purple-red haemoglobin (the colour of venous blood)
and oxygen. The oxygen then passes into the cells where it is needed by diffusion.
It also protects your body from the entry of bacteria and other pathogens
(disease-causing micro-organisms) through an open wound, and protects
the new skin from damage as it grows.
Human blood groups
Antigen special protein on the surface of all cells that allow cells to recognize other cell.
They allow cells to recognize each other and also to recognize cells from different
If the cells of your immune system recognize a foreign antigen on a cell in your body, they
will produce antibodies and destroy the foreign cells.
A number of different antigens are found specifically on the surface of the RBC. This
gives us the different human blood groups.
There are several different blood grouping systems, but the best known is the ABO
system.
In this system there are two possible
◦ antigens on the red blood cells – antigen A and antigen B.
◦ antibodies in the plasma, known as antibody a and antibody b.
Unlike most other antibodies, these antibodies are present in your body all the time.
They are not made in response to a particular antigen.
Four combinations of antibodies and antigens which give rise to the four ABO blood
groups.
If the blood from different blood groups is mixed together, there may be a reaction
between the antigen and the complementary antibody which makes the red blood cells
stick together (agglutinate).
For example,
◦ blood group O has no antigens so it can be given to anyone, but someone who has
blood group O has both antibodies so they can only receive group O blood!
◦ On the other hand someone with blood group AB which has no antibodies can
receive any type of blood!
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Unit 5: Classification
5.1 Principles of classification
This great variety of life is called diversity or biodiversity.
This grouping of similar living things is known as classification.
Biologists classify living things for the following reasons:
1. To simplify their study.
2. To bring order out of chaos or confusion.
3. To try to understand how life originated.
What is a species?
The most common and widely used definition of a species is:
o A group of organisms that can breed successfully with one another to produce
fertile offspring.
The process of classifying living organisms is known as taxonomy, and the system we
use groups living things into categories called taxa.
The main taxonomic categories are kingdom, phylum (or for plants, division), class,
order, family, genus and species.
The largest groups into which living organisms are divided are the kingdoms.
Kingdoms are subdivided into phyla, each phylum into classes, each class into orders,
each order into families, each family into genera and each genus into species.
The species is the smallest unit of classification. There will be many different types of
organisms
◦ The first name is the name of the genus to which the organism belongs.
◦ It is written with a capital letter.
◦ Sometimes the name of the genus is reduced to just the capital letter,
◦ Example H. sapiens, C. simensis.
◦ The second name is the name of a species to which the organism belongs.
◦ It is written with a small letter.
◦ The two names are underlined when handwritten or in italics when printed.
Living things are classified and named for the following main reasons:
1. To create an internationally accepted way of referring to a particular living thing.
2. To avoid confusion created by different languages.
3. To help in simplifying classification and study of living things.
To reach those names, the organism needs to be completely classified from the kingdom
downwards.
What is a kingdom?
A kingdom is the largest taxon and consists of all the other taxa. In the modern
classification, There are five kingdoms namely:
1. Monera (bacteria)
2. Protista (also known as the protoctista)
3. Fungi
4. Plantae
5. Animalia
This system of classification is known as the five-kingdom system.
Kingdom Monera
Kingdom Protista
Are all microscopic single-celled organisms that do have a nucleus – they are eukaryotic
cells.
They include plant-like organisms that can move around and animal-like organisms that
cannot move.
Make up much of the plankton found in the oceans and are the basis of the food supply
for all the organisms in the sea.
Some protista cause serious disease in human beings.
Examples
Plasmodium falciparum_ Causes malarial disease
Entamoeba histolyca_ Causes amoebic dysentery
Trypanosoma_
Dinoflagellates are protista that cause bioluminescence in the seas and oceans when
they produce a greenish light.
Kingdom Fungi
Large and very successful group – there are around 80 000 species.
Vary in size from single-celled yeasts to enormous puffballs.
Eukaryotic and usually multicellular.
They are heterotrophic
◦ Many fungi are saprotrophs_ they feed on dead material.
Saprophytic fungi usually produce huge numbers of spores, which
float on the wind to other dead material.
They play a vital role within ecosystems as decomposers.
Examples:
Rhizopus (bread mould),
Mucor and
Penicillium (the fungus that produces the antibiotic
penicillin).
◦ Fungi can be parasites.
They attack plants more than animals, although some fungi, such as
Candida albicans (thrush)
Tinea pedis (athlete’s foot)
Mildews cause enormous damage to plants.
◦ Some fungi are mutualists. This means they live in close association with another
organism and both benefit.
Examples are
Lichens, which are a combination of a fungus and green
algae or blue-green bacteria, and
Mycorrhizae, an association between a fungus and the
roots of a plant.
◦ Yeast, which makes injera rise and allows us to make alcohol, is one of the few
single-celled fungi.
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Kingdom Plantae
Includes from tiny mosses to giant trees.
So far botanists have identified around 300 000 living plant species, and over 80% of
these are flowering plants.
Plants are enormously important –
◦ Source of the fossil fuel coal
◦ They provide:
– Food, oxygen, building materials, clothing, medicines and many other things.
The main characteristics of all plants include:
– Eukaryotic cells.
– Multicellular organisms.
– Chlorophyll and carry out photosynthesis.
– Predominantly land dwelling.
– Most have a waxy cuticle that helps to prevent drying out.
Plant divisions are the same as animal phyla. The four most important divisions are:
◦ Bryophyta – the mosses and liverworts
◦ Pteridophyta (Filicinophyta) – the ferns
◦ Gymnospermae (Coniferophyta) – the conifers
◦ Angiospermae (Angiospermophyta) – the true flowering plants
Division Gymnospermae
Division Angiospermae
The flowering plants are the biggest group of land plants on the Earth.
Their reproductive structures are carried in flowers.
◦ The biggest flowers in the world belong to Rafflesia arnoldii and they can be as
much as a metre across.
◦ The smallest belong to Wolffia globosa and they are less than 2 mm across.
Whatever the size of the flowers, they carry the reproductive parts of the plant.
The main characteristics of the angiosperms are:
◦ They have flowers as reproductive organs.
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Kingdom Animalia
Includes the animals:
There are at least two million species of animals alive today.
Multicellular and heterotrophic – they feed on other organisms.
They differ from the other four kingdoms in that:
◦ They exhibit locomotion - can move their bodies from one place to another
◦ Their cells do not have cell walls.
◦ They have nervous systems so they are sensitive to their surroundings.
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Phylum Coelenterata
Include some exceptionally beautiful creatures and also some very poisonous ones.
◦ Example_ Sea anemones, hydra, jelly fish and coral
Soft bodies with a ring of tentacles for capturing prey.
Stinging cells on their tentacles for poisoning or immobilizing prey and predators.
Two layers of cells in their bodies that surround a central cavity.
Only one opening, the mouth, and their bodies have radial symmetry.
They don’t have a circulatory system but they do have a complete digestive system with
both mouth and anus.
Example__ Ascaris, Filariidae
Phylum Annelida
body divided into regular segments with structures and organs repeated along the body.
they have a closed blood circulatory system.
they are hermaphrodites and they have bristle like structures called chaetae to help
them move. they are found in moist soil and water and most are free-living.
Example earthworm, Lumbricus terrestris, Hirudo spp, the medicinal leech.
Phylum Mollusca
have a wide range of lifestyles and include the most intelligent of the invertebrate
species.
Octopi and squid have well developed brains.
they may have shells or be shell-less, live in the sea, or in fresh water or on land.
the main features
a soft muscular foot with a soft body, which is often protected by the shell.
their bodies are divided into head, foot and visceral mass and they are not segmented.
they breathe through gills.
◦ Examples slugs and snails
Phylum Echinodermata
The skin contains many spines.
Although they appear very simple they have a mouth (on the lower side), a gut and an
anus (on the upper side).
They are all marine animals, and move around using tube feet. The adults have five arms,
but the larval stages do not. Examples_ sea urchins, starfish and brittle
Phylum Arthropoda
This phylum gets its name from two Greek words, arthron – joint, and podos – foot.
they cannot grow very large.
an external exoskeleton made of chitin that prevents excessive water loss but also limits
their growth.
are animals with segmented bodies and jointed limbs.
well-developed nervous system and a complete gut from the mouth to anus.
divided into a number of classes according to the number of limbs, presence and number
of antennae and number of body parts.
These include insecta, crustacea, arachnida, diplopoda and chilopoda.
The insecta
three pairs of jointed legs on the thorax along with one or two pairs of wings. On their
head they have a pair of antennae and one pair of compound eyes.
Insects include flies, butterflies and moths, beetles, wasps and bees and many other
common groups.
The crustacean
◦ are often confused. In fact some scientists put them all in one group. They both
have long bodies with many segments and lots of legs
Phylum Chordata
Vertebrate animals have a vertebral column/backbone. In addition, they also have the
following features:
1. An internal skeleton (endoskeleton) made of bone or cartilage.
2. A closed blood circulatory system consisting of blood vessels.
3. A well-developed nervous system.
4. Two pairs of limbs.
5. Kidneys as excretory organs.
Vertebrate animals form the largest group of the phylum Chordata and they are divided
into five classes:
◦ Pisces – the fish
◦ Amphibia – the amphibians
◦ Reptilia – the reptiles
◦ Aves – the birds
◦ Mammalia – the mammals
Class Pisces
These are the fishes. They are aquatic, i.e. they live in water, except the mudskipper and
lung fish, which can spend short periods breathing in air.
They have streamlined bodies with scales on their skin.
They use gills for gaseous exchange and have fins for swimming.
They have a lateral line system for hearing and most fish are dark on the dorsal (back)
side and lighter on the ventral side.
Fish are ectothermic – they rely on heat from their environment to regulate their body
temperature.
The class Pisces is divided into two subclasses:
◦ Bony fish (teleosts) – examples include Tilapia, Nile perch, cod, mackerel and
catfish.
◦ Cartilaginous fish (elasmobranchs) – examples include sharks, skates and rays.
Class Amphibia
This class includes the amphibians (frogs, toads, newts and salamanders).
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The word amphibian comes from two Greek words amphi, which means both, and bios,
which means life.
This means that amphibians spend part of their lives (as larvae or tadpoles) in water and
part of it (as adults) on land.
The amphibians were the first vertebrates to colonise the land.
They have simple sac-like lungs (which are not very efficient) and smooth, moist skin,
which is also used as a respiratory surface.
Their lifecycle includes metamorphosis, and they need water for successful reproduction
as fertilisation is external and the larval form (tadpole) is aquatic.
Gills are only present in the larval forms.
Amphibians are ectothermic – they rely on heat from their environment to regulate their
body temperature.
Class Reptilia
Class Aves
◦ The sternum or breastbone has been enlarged into a big keel shape for the
attachment of the wing muscles, particularly in those birds that fly.
This forms the tasty meat that is so good to eat!
◦ The jaws are toothless and are covered by a horny beak.
◦ Birds reproduce using well-developed eggs with a hard shell.
◦ Birds have light skeletons, which makes it easier for them to fly.
◦ They are also endothermic, which means they use heat produced by their own
metabolism to regulate their body temperature.
◦ Of the main chordate features, only the hollow nerve cord remains in an adult
bird, although the others can be seen at stages during the development of the
embryo in the egg.
Class Mammalia
Mammals are classified according to the way their young are produced. There are three
sub-classes of mammals:
◦ Egg-laying mammals – lay eggs, e.g. duck-billed platypus.
◦ Marsupials – produce immature young, which are nourished by milk in the
pouch, e.g. kangaroo, koala bear, opossum.
◦ Higher mammals – produce fully developed young, which are nourished by milk
from the mammary glands, e.g. rats, cows, elephants, cats, monkeys and humans.
Mammals are a very successful group of animals, which give us the biggest animals in
most of the habitats on the Earth.
There are even flying mammals, as bats have been adapted to fly through the air on their
leathery wings!
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Homeostasis
Homeostasis is maintenance of normal internal conditions in a cell or an organism by means
of self-regulating mechanisms.
o Feedback mechanisms involving both the nervous and hormonal systems play an
enormous role in maintaining homeostasis.
Most of these control systems in the body are examples of negative feedback. This means:
o When levels of a substance in the body rise, changes are made which lower the levels
again.
o When levels of a substance fall, changes are made so that it rises again to the original
levels.
Homeostasis is essential for proper body function to ensure survival of the organism.
Some of the main threats to stable state inside your body
¶ Your daily glucose intake may varies
¶ Whenever you respire, poisonous waste build up in your body that change the pH of
your blood or may kill you.
¶ Whenever you exercise you produce heat from your muscle that can increase your
core body temperature.
¶ The amount of water and salt you take in vary greatly throughout the day.
Controlling temperature (temperature regulation)
Heat:
It is a form of energy which is produced in a number of ways including by:
o The sun
o Artificial heating systems.
o The chemical reactions in the body.
Temperature:
It is a way of measuring hotness or coldness (the effect of heat energy) on a relative
scale.
Wherever we go and whatever we do our body temperature is maintained at the
temperature (around 37 °C) at which our enzymes work best.
It is not the temperature at the surface of an organism which matters – the skin
temperature can vary enormously without causing harm.
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It is the temperature deep inside the body, known as the internal or core body
temperature, which must be kept stable.
We can get a good measure of our human core body temperature by taking the
temperature in the mouth, in the anus or on the surface of the eardrum.
Living organisms are continually gaining heat from cellular respiration and by
conduction, convection and radiation from their surroundings.
≈ Conduction: is the transfer of heat by physical contact. Eg. If you pick up an ice
cube you’ll lose heat to the ice, if you walk barefoot on stone on sunny day, you
will absorb heat from the stone.
≈ Convection: wind helps move air away from your body by convection, bringing
along new cooler air and thus increasing the transfer of heat from skin to air
≈ Radiation: the transfer of heat from a warmer object to a cooler on by infrared
radiation, that is, without direct contact. Eg you’ve been warmed by heat from
the sun, a fire or a radiator in a building.
≈ Evaporation: vaporization of water from a surface leads to loss of heat. Eg.
When sweat evaporates from your skin.
They are also constantly losing heat by the evaporation of water from the body
surfaces and by conduction, convection and radiation to their surroundings.
It is the balance of these gains and losses that gives the core temperature.
With regard to temperature regulation animals can be divided into two groups.
These are:
Poikilotherms
Homeotherms
a) Poikilotherms (Exothermic animals)
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These animals produce little internal heat and have little insulation.
Animals whose body temperature is governed by the external temperature.
Ectothermic body temperature rises and falls along with the temperature of the
surrounding environment
They rely largely on the environment for their body heat.
Their body temperature can vary according to the environment. E.g., fish, amphibian
and reptiles.
many mammals have thick, furry coats and so cannot evaporate sweat easily from the
skin surface even when they are getting hot.
Some animals, such as dogs and cats, only have sweat glands in small areas of the skin
such as the feet.
to increase the amount of heat lost through evaporation, animals may lick themselves,
coating parts of their bodies with saliva which evaporates and cools them down.
They also pant which allows water to evaporate from the moist surfaces of the mouth &
cools them down.
4) Vasoconstriction
if your core temperature begins to fall the blood vessels which supply your skin
capillaries constrict (close up) to reduce the flow of blood through the capillaries.
This reduces the heat lost through the surface of the skin, and makes you look paler.
This is known as vasoconstriction and it works to keep you as warm as possible.
More blood flows through the deeper blood vessels of your skin as a result.
5) Piloerection (pulling the hairs upright)
~ The hair erector muscles contract. In furry animals this pulls the hairs upright, trapping
an insulating layer of air which is very effective at conserving heat.
~ Our hairs are also pulled upright, but we have so little body hair that it has little or no
effect on heat conservation.
~ The most obvious effect is that we get goose bumps on our skin – each bump is the
contracted muscle pulling on a hair.
~ When the core temperature starts to climb, the hair erector muscles which move our
body hair all relax and our hair lies very flat against our skin.
~ Again, in humans this has very little effect, but in hairy animals this reflex action is
important because it reduces the layer of insulating air trapped in the fur and so makes
it easier to lose heat by convection.
6) Shivering and metabolic responses
Ꙫ If your core body temperature drops your metabolic rate speeds up, producing more
heat energy so your body temperature starts to go up.
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Ꙫ Your liver in particular is involved in this because it is a very large organ which carries
out many different metabolic reactions.
Ꙫ As part of this response, you may start to shiver.
Ꙫ When you shiver your muscles contract rapidly, w/c involves lots of cellular respiration
Ꙫ This releases some energy as heat which is used to raise the body temperature.
Ꙫ As you warm up, shivering stops.
Ꙫ But if your core body temperature starts to rise, the metabolic rate drops so less heat is
produced.
7) Fat layer under the skin (subcutaneous fat)
it is important that homoiotherms only loss or gain heat when they really need to. So
under the surface of the skin is an insulating layer of fat.
This prevents unwanted heat loss. It is particularly noticeable in animals which live in
very cold conditions, for example, seals and whales.
The very thick layer of fat under their skin is known as blubber.
Like poikilotherms, homoiotherms use behavioural methods to control their internal
body temperature.
B. Behavioural methods of temperature regulation in homoiotherms
1) Clothing
∫ People choose suitable clothes for the weather as we do not have fur or feathers to keep
us warm.
∫ We wear warm clothes when the weather is cold and fewer, cooler clothes when the
external temperature is hot.
2) Seeking shade or shelter
∏ Like many other animals, people look for shade to keep them cool when it is hot and
sunny, and look for shelter from cold, wet or windy conditions to help prevent excess
heat loss and keep them warm, for example, native male rats live underground in
burrows all the time in arid deserts.
3) Taking high-calorie food in cold conditions
We need to use more metabolic energy to keep warm so we eat high-calorie food in
cold conditions. Birds and other mammals do the same.
4) Hibernation
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A photosynthesizing machine
• Photosynthesis is amazing process which is the basis of all life on earth.
• In this process plants:
• Take the inorganic molecules CO2 and water and use them to produce the
organic molecule glucose along with inorganic oxygen in the presence of energy
from light.
• Provides the food we eat and the oxygen we breathe.
• It all takes place in the leaves of plants.
• Whenever there is light available leaves are perfectly adapted to allow the
maximum possible amount of photosynthesis to take place.
4.2 Photosynthesis
• Like all living organisms plants need food to provide them with the energy for
respiration, growth and reproduction.
Heterotrophs (feeding on others)
– Many organisms, including all animals, eat food to get the energy they need to
live.
Autotrophs (feeding themselves)
– plants produce their own food in a process known as photosynthesis.
– photosynthesis takes place in the green parts of plants, especially the leaves, in
the presence of light.
What is photosynthesis?
• Photosynthesis can be summed up in the following equation:
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During photosynthesis
– Light energy from the sun is absorbed by a green substance called chlorophyll.
– The energy is used to convert CO2 from the air and water from the soil into a simple
sugar, glucose, with oxygen as a by-product.
Glucose produced during photosynthesis:
– Some used immediately by the cells of the plant for respiration to provide energy for cell
functions, growth and reproduction.
– The energy released in respiration is used to build up smaller molecules into bigger
molecules:
– Glucose is built into:
• Starch for storage.
– Glucose is soluble_ it affect the water balance.
– Starch is insoluble_ so it has no effect on the concentration of solutions.
– Starch is also a very compact molecule, so it takes up relatively little
room.
– Starch is easily broken down again into glucose molecules when it is
needed.
• Molecules like fructose (fruit sugar) and sucrose (a double sugar unit) to be
transported around the plant.
• More complex carbohydrates like cellulose to make new plant cell walls.
• Sugars, along with nitrates and other nutrients used to make amino acids.
– These amino acids are then built up into proteins to act as enzymes and
make up much of the cytoplasm of the cells.
• Fats and oils (lipids) for storage in seeds and to make up part of the cell
membranes.
• Chlorophyll, using minerals such as magnesium taken up from the soil.
What is needed for photosynthesis?
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– For photosynthesis to occur successfully CO2, Water, supply of light energy and
green pigment Chlorophyll is needed.
• The simplest way of demonstrating the need of a plant for light is to deprive it of light
and see what happens__ this is called destarching the plant – and then compare the
leaves with those from a plant kept in the light.
• Destarching is the process of eliminating starch reserves from a plant by
depriving it of light.
• Alternatively you can cover either a whole leaf or part of a leaf of a destarched plant with
black paper or foil. This prevents light from reaching the covered area.
Leaf A is from a destarched plant which has been kept in the dark; leaf B is from a plant kept in the light.
• However, the individual plant cells still produce carbon dioxide as they respire and so it
is almost impossible to entirely deprive a plant of the gas.
• A more valid approach is to change the levels of carbon dioxide in the air surrounding a
plant in high-intensity light and measure the changes in the rate of photosynthesis.
This shows that without chlorophyll photosynthesis did not take place.
Osmosis
Vital for keeping the plant cells turgid.
It is also very important for moving water around within the plant itself.
Water moves into the plant root cells across the cell membrane along a concentration
gradient by osmosis.
The roots are covered with special cells, which have tiny hair-like extensions called the
root hairs.
o Root hairs increase the surface area for osmosis to take place.
Once water has moved into the root hair cells, the cytoplasm of the root hair cells is more
dilute than cytoplasm of the surrounding cells.
Water moves into the neighboring cells by osmosis
These cells now have more dilute cytoplasm than the cells next to them, and the water
moves on by osmosis until it reaches the xylem and transpiration stream.
Active Transport in Plants
Mineral ions in the soil are usually found in very dilute solutions – more dilute than the
solution within the plant cells.
By using active transport (use ATP) plants can absorb these mineral ions, needed for
making proteins, and other important chemicals from the soil, even though it is against a
concentration gradient.
Phloem
Made up of living tissue
Transport organic martial made by photosynthesis
Use energy to move substance (active transport)
Food substance move both up and down of the plant
Thin walled and contain liquid reach food
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Xylem
It is dead and here is no active transport taking place
Carries water and mineral ions from the soil around the plant.
Water is absorbed from the soil into the plant by roots.
The movement of the water in the xylem is due to transpiration and it is passive.
Water only moves up from the roots to the leaves.
As water evaporates from the surface of the leaves, water is pulled up through the xylem
to take its place.
This constant moving of water molecules through the xylem from the roots to the leaves
is known as the transpiration stream.
Root pressure
Water is continuously absorbed in the xylem vessels of the root.
It builds up a hydrostatic pressure that pushes the water up in the stem.
This pressure is referred to as root pressure.
Capillarity
This is the tendency of water to rise up through very narrow tubes.
Xylem vessels have very small diameters which enables water to rise up in vessels of the
plant.
The processes of cohesion and adhesion constitute the capillarity force
Water molecules attract one another by cohesive forces.
The attraction between water molecules and xylem walls is known as adhesion.
Transpiration pull
Is a biological process which the force of pulling is produced inside the xylem
tissue.
This force helps in the upward movement of water into the xylem vessels
Transpiration pull is believed to be a result of an interplay of several forces e.g. cohesion
and adhesion.
In the xylem, two physical forces help the water to move up. Adhesive and cohesive forces
Adhesive forces
Between the water and the walls of the xylem which support the whole column of water,
no matter how tall it is.
Cohesive forces
The attraction of molecules for the other molecules of the same kinds
The water molecules tend to stick together and get pulled upwards like a string of
beads.
When water reaches the xylem in the leaves, there is a reversal of the situation in the
roots.
Temperature:
A change in temperature affects both the kinetic movement of water molecules and
the relative humidity of air.
An increase in temperature increases the rate of transpiration if other factors are kept
constant.
The higher the temperature, the more evaporation takes place.
Wind:
On a windy day, the saturated vapour is continuously swept away from the stomata
hence exposing the stomata to less humid air.
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o Some plants are more resistant to water loss by transpiration than others.
By choosing crops which are suited to the conditions where we are growing them, we
can improve our yields and make sure that transpiration works for us and does not cause
our plants to wilt and fail.
– The seed coat, which may be thin and papery like the covering on a groundnut or
very strong and hard like the shell of a nut.
During germination,
• Changes which occur during the germination of a bean seed – a dicot seed.
1. The seed absorbs water through the micropyle (small hole) and swells.
2. The testa (seed coat) bursts and the radicle emerges.
3. As the radicle elongates it pushes the seed out of the ground.
The curved part of the radicle which protrudes is called the epicotyl.
The seed coat is discarded and the two cotyledons (seed leaves) open out and
begin to photosynthesize.
4. The Plumule emerges from in between the cotyledons and produces the first true
leaves. At this stage, the young plant is called a seedling.
Epigeal germination
– Cotyledon is carried above the soil.
– Most dicotyledonous plants have seeds which exhibit Epigeal germination.
• Example__ Castor oil seeds, groundnuts, Cotton and Bambara nuts.
– Epigeal germination also occurs in a few monocotyledonous.
• Example___ Onions and lilies.
Hypogeal germination
– A type of germination in which the cotyledons remain underground.
– Monocotyledon exhibit hypogeal germination
• Examples_ wheat, sorghum and millet.
– A few dicotyledonous seeds such as kidney beans and broad beans exhibit hypogeal
germination.
Germination of any type can occur only in a seed which is viable /alive.
• The length of time a seed can remain viable varies in different species.
– Many seeds can remain viable for up to 50 years if properly stored.
Three things will determine whether your seeds are still viable:
• Age of the seeds.
– All seeds will be viable for one to two years. After two or three years, germination
rates will drop.
• The type of seed.
– Some seeds like onions and sweet corn have a short lifespan
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Tropic responses
– Responses to stimuli that come from one direction are known as tropisms.
Phototropism
– Tendency of plants to move or grow towards light
– Shoots grow towards the light, it is termed us positive phototropism.
Geotropism
– It is movement in response to the stimulus of gravity.
– Roots are positively geotropic (they grow towards gravity) while shoots are
negatively geotropic (they grow away from gravity).
– The response of seedlings to gravity can also be investigated using a piece of
apparatus known as a clinostat.
Hydrotropism
– The type of response by which roots grow towards water is termed
hydrotropism.
These responses are described as directional responses, tropic responses or tropisms.
• The upward growth of the shoot and the downward growth of the root, when the bean
seedlings were placed horizontally, involve plant hormones.
• In the shoot,
– The force of gravity causes an accumulation of IAA on the underside of the
plumule.
– This promoted more growth in that region than the upper portion.
• In the root
– The downward growth of the root is also influenced by IAA, but in the root tip the
hormone inhibits growth, rather than stimulating it.
– The force of gravity causes an accumulation of IAA on the underside of the root,
resulting in reduced growth in that region.
– The corresponding upper side of the root, which had very little or no IAA, grows
faster than the underside.
– This differential growth results in the downward curvature of the root.
– When positive hydrotropism occurs, roots come into close contact with water. This makes
it possible for them to absorb as much water and mineral salts as possible for the plant.
– When a plant responds positively to light its leaves become well exposed to it. This
maximises the amount of light available for photosynthesis.