Genetics in Minutes Tom Jackson PDF Download
Genetics in Minutes Tom Jackson PDF Download
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Genetics In Practice A Clinical Approach For Healthcare Practitioners
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Text Genetics In Literary Modernism And Other Essays 1st Edition Hans
Walter Gabler
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CONTENTS
Title Page
Introduction
Life
Inheritance
The cell
DNA
Sex
Evolution
Classification
Ecology
Animal relationships
Neo-Darwinism
Origins of Life
Humans and genetics
Genetics and technology
Glossary
Picture credits
Copyright
About the Author
Other Titles in the Series
About the Book
Introduction
The simplest and oldest life forms are the bacteria, which have a
body made from a single tiny ‘prokaryotic’ cell (see here). They are
joined by the archaea, which to the uninitiated look more or less the
same but have some important distinctions. Other single-celled
organisms, including things like amoebae and protozoa, have much
larger and more complex cells, and this ‘eukaryotic’ cell type (see
here) is the one used by multicellular organisms such as plants,
animals and fungi.
E very living thing must feed, or putting it more precisely, they must
access a source of nutrition. Plants get this in the form of sugars
from photosynthesis and mineral nutrients absorbed from their
surroundings (soil is a good place to start). Animals and fungi get their
nutrition from the bodies of other organisms. Some single-celled
organisms can get nutrition using both techniques!
Johannsen had no idea what form genes took. His term simply meant
a unit of inheritance: the genes inherited from the parent carry the
instructions required to build the body of a child. The term is also
used to describe particular measurable characteristics, so there is a
gene for hair type, eye colour, etc. However, today we know that
genetic material is a code-carrying molecule of DNA, so a section of
DNA can also be described as a gene. Matching this chemical
definition of genes with the anatomical one is a key goal of genetic
research.
T he core activity of genetics is to identify genes among the DNA held in cells, and
figure out their function.
Gregor Mendel
Mendel’s ‘Law of Segregation’ said that each plant had two versions
of each factor (gene). When it came to making pollen, the paired
versions of each factor were always split. Any offspring would inherit
only one version from each parent, with the two combining making a
new pair. Another rule, the ‘Law of Independent Assortment’, states
that every factor moves between generations independently of the
others. A third law, the ‘Law of Dominance’ asserts that some types
of factor have a hierarchy that leads to dominant ones being
expressed in the organism’s outward appearance, while recessive
ones remain hidden. Later research would come to qualify the second
law, and some regard the third as less significant because it does not
apply to all factors, but together these laws have become the
foundation stones of classical genetics.
Mendel’s diligent experiments with pea plants gave the first insight into how inherited
factors controlled development.
Phenotype
A genotype contains two alleles for each gene. If the alleles are
identical, then it is described as homozygous – in other words, when it
comes to dividing the alleles up to make the sex cells that are used in
producing the next generation (pollen, sperm, eggs etc), each cell will
definitely contain the same allele. When a genotype contains two
differing alleles it is described as heterozygous. As a result, half the
sex cells will have one allele, and half the other. Nevertheless,
homozygous and heterozygous genotypes can still produce the same
phenotype, thanks to an additional complication known as dominance
(see here).
T hese guinea pigs all have the same gene that controls hair colour; but each has
inherited a different version, or allele, of that gene.
Genome and gene pool
The ‘gene pool’ is another familiar term but one with a rather
different meaning. It refers to the enire set of genes, including their
many different alleles, that exists throughout a population of
organisms. The gene pool represents the genetic variation wihthin a
group of organisms.
As well as studying the genes of an individual, geneticists also seek to understand the
behaviours of genes shared by a community, population or entire species.
Hybrids
It was this breakthrough that allowed him to discover that one allele is
not always equal to another. Some are dominant over others, and it is
this interplay of alleles that shows how a particular genotype leads to
a corresponding phenotype.
T his żubroń is a hybrid of domestic cattle and European bison.
Dominance
The next generation of plants all receive a T from one parent and a t
from the other. They all have a genotype of Tt. The T allele is
dominant over the t, and so all Tt genotypes lead to a tall phenotype.
Next, Mendel crossed a Tt plant with itself. This led to four
genotypes, all equally likely: TT, Tt, tT and tt. Any genotype with the
dominant T allele results in a tall phenotype, while only the tt
genotype produces the short phenotype. When explained like that, the
3:1 ratio of tall to short discovered by Mendel makes perfect sense. It
also highlights the incredible leap of imagination Mendel made to
figure it all out.
Recessive traits
Some traits, such as red hair, are entirely recessive but have little
effect on an organism’s chance of survival. Other examples, such as
albinism (opposite), can be more troublesome. In all cases, recessive
phenotypes are infrequent in the population because they require a
homozygous, double-recessive genotype. Many genotypes can contain
a recessive allele that remains hidden by a dominant partner. Only
when two heterozygous parents, or ‘carriers’, produce offspring is
there potential for the recessive phenotype to appear – seemingly out
of the blue.
Exploring the Variety of Random
Documents with Different Content
§ 30. Nomenclature by Position.
Two passages of Aristoxenus are quoted by Westphal in support of
his contention. The first (p. 6 Meib.) is one in which Aristoxenus
announces his intention to treat of Systems, their number and
nature: 'setting out their differences in respect of compass
(megethos), and for each compass the differences in form and
composition and position (tas te kata schêma kai kata synthesin
kai kata thesin), so that no element of melody,—either compass or
form or composition or position,—may be unexplained.' But the word
thesis, when applied to Systems, does not mean the 'position' of
single notes, but of groups of notes. Elsewhere (p. 54 Meib.) he
speaks of the position of tetrachords towards each other (tas tôn
tetrachordôn pros allêla theseis), laying it down that any two
tetrachords in the same System must be consonant either with each
other or with some third tetrachord. The other passage quoted by
Westphal (p. 69 Meib.) is also in the discussion of Systems.
Aristoxenus is pointing out the necessity of recognising that some
elements of melodious succession are fixed and limited, others are
unlimited:
The notes which enter into this melody form the scale f♯-g-a-b-c♯-d-
e-f ♯ , which is an octave of the Dorian species (e-e on the white
notes). Hence if f ♯, on which the melody ends, is the key-note, the
mode is the Dorian. On the other hand the predominant notes are
those of the triad a-c♯-e, which point to the key of a major, with the
difference that the Seventh is flat (g instead of g ♯). On this view the
music would be in the Hypo-phrygian mode.
However this may be, the most singular feature of this fragment
remains to be mentioned, viz. the agreement between the musical
notes and the accentuation of the words. We know from the
grammarians that an acute accent signified that the vowel was
sounded with a rise in the pitch of the voice, and that a circumflex
denoted a rise followed on the same syllable by a lower note—every
such rise and fall being quite independent both of syllabic quantity
and of stress or ictus. Thus in ordinary speech the accents formed a
species of melody,—logôdes ti melos, as it is called by Aristoxenus
[40]. When words were sung this 'spoken melody' was no longer
heard, being superseded by the melody proper. Dionysius of
Halicarnassus is at pains to explain (De Comp. Verb., c. 11), that the
melody to which words are set does not usually follow or resemble
the quasi-melody of the accents, e.g. in the following words of a
chorus in the Orestes of Euripides (ll. 140-142):—
he notices that the melody differs in several points from the spoken
accents: (1) the three first words are all on the same note, in spite of
the accents; (2) the last syllable of arbylês is as high as the second,
though that is the only accented syllable: (3) the first syllable of
tithete is lower than the two others, instead of being higher: (4) the
circumflex of ktypeite is lost (êphanistai), because the word is all
on the same pitch; (5) the fourth syllable of apoprobate is higher in
pitch, instead of the third. In Mr. Ramsay's inscription, however, the
music follows the accents as closely as possible. Every acute accent
coincides with a rise of pitch, except in hoson, which begins the
melody, and in esti, for which we should perhaps read the orthotone
esti. Of the four instances of the circumflex accent three exhibit the
two notes and the falling pitch which we expect. The interval is either
a major or a minor Third. In the other case (zês) the next note is a
Third lower: but it does not seem to belong to the circumflexed
syllable. All this cannot be accidental. It leads us to the conclusion
that the musical notes represent a kind of recitative, or imitation of
spoken words, rather than a melody in the proper sense of the term.
If any considerable specimen of the music of Euripides had survived,
it might have solved many of the problems with which we have been
dealing. The fragment before us extends over about six lines in
dochmiac metre (Orestes 338-343), with the vocal notation: but no
single line is entire. The key is the Lydian. The genus is either
Enharmonic or Chromatic. Assuming that it is Enharmonic—the
alternative adopted by Dr. Wessely—the characters which are still
legible may be represented in modern notation as follows:
[Listen]
After every allowance has been made for the probability that these
signs or some of them have reached us in a corrupt form, it is
impossible to reduce them to the ordinary notation, as Meibomius
sought to do. The scholar who first published them as they stand in
the MSS. (F. L. Perne, see Bellermann, Tonleitern, p. 62) regarded
them as a relic of a much older system of notation. This is in
accordance with the language of Aristides, and indeed is the only
view consistent with a belief in their genuineness. They are too like
the ordinary notation to be quite independent, and cannot have been
put forward as an improvement upon it. Are they, then, earlier?
Bellermann has called our attention to a peculiarity which seems fatal
to any such claim. They consist, like the ordinary signs, of two sets,
one written above the other, and in every instance one of the pair is
simply a reversed or inverted form of the other. With the ordinary
signs this is not generally the case, since the two sets, the vocal and
instrumental notes, are originally independent. But it is the case with
the three lowest notes, viz. those which were added to the series at a
later time. When these additional signs were invented the vocal and
instrumental notes had come to be employed together. The inventor
therefore devised a pair of signs in each case, and not unnaturally
made them correspond in form. In the scale given by Aristides this
correspondence runs through the whole series, which must therefore
be of later date. But if this is so, the characters can hardly represent
a genuine system of notation. In other words, Aristides must have
been imposed upon by a species of forgery.
7. Does the fragment of the Orestes tell for or against the Modes
described by Aristides?
The scale which is formed by the notes of the fragment agrees, so far
as it extends, with two of the scales now in question, viz. the
Phrygian and the Dorian. Taking the view of its tonality expressed in
the last chapter (p. 93), we should describe it as the Dorian scale of
Aristides with the two highest notes omitted. The omission, in so
short a fragment, is of little weight; and the agreement in the use of
an additional lower note (Hyper-hypatê) is certainly worth notice. On
the other hand, the Dorian is precisely the mode, of those given in
the list of Aristides, which least needs defence, as it is the most
faithful copy of the Perfect System. Hence the fact that it is verified
by an actual piece of music does not go far in support of the other
scales in the same list.
If our suspicions are well-founded, it is evident that they seriously
affect the genuineness of all the antiquarian learning which Aristides
sets before his readers, and in particular of his account of the
Platonic modes. I venture to think that they go far to deprive that
account of the value which it has been supposed to have for the
history of the earliest Greek music.
For the later period, however, to which Aristides himself belongs,
these apocryphal scales are a document of some importance. The
fact that they do not agree entirely with the species of the Octave as
given by the pseudo-Euclid leads us to think that they may be
influenced by scales used in actual music. This applies especially to
the Phrygian, which (as has been shown) is really diatonic. The
Ionian, again, is perhaps merely an imperfect form of the same scale,
viz. the octave d-d with lower d omitted. And the Syntono-lydian may
be the Lydian diatonic octave c-c with a similar omission of the lower
c.
§ 35. Evidence for Scales of different
species.
The object of the foregoing discussion has been to show, in the first
place, that there was no such distinction in ancient Greek music as
that which scholars have drawn between Modes (harmoniai) and
Keys (tonoi or tropoi): and, in the second place, that the musical
scales denoted by these terms were primarily distinguished by
difference of pitch,—that in fact they were so many keys of the
standard scale known in its final form as the Perfect System. The
evidence now brought forward in support of these two propositions is
surely as complete as that which has been allowed to determine any
question of ancient learning.
It does not, however, follow that the Greeks knew of no musical
forms analogous to our Major and Minor modes, or to the mediaeval
Tones. On the contrary, the course of the discussion has led us to
recognise distinctions of this kind in more than one instance. The
doctrine against which the argument has been mainly directed is not
that ancient scales were of more than one species or 'mode' (as it is
now called), but that difference of species was the basis of the
ancient Greek Modes. This will become clear if we bring together all
the indications which we have observed of scales differing from each
other in species, that is, in the order of the intervals in the octave. In
doing so it will be especially important to be guided by the principle
which we laid down at the outset, of arranging our materials
according to chronology, and judging of each piece of evidence
strictly with reference to the period to which it belongs. It is only thus
that we can hope to gain a conception of Greek music as the living
and changing thing that we know it must have been.
1. The principal scale of Greek music is undoubtedly of the Hypo-
dorian or common species. This is sufficiently proved by the facts (1)
that two octaves of this species (a-a) constitute the scale known as
the Greater Perfect System, and (2) that the central a of this system,
called the Mesê, is said to have been the key-note, or at least to have
had the kind of importance in the scale which we connect with the
key-note (Arist. Probl. xix. 20). This mode, it is obvious, is based on
the scale which is the descending scale of the modern Minor mode. It
may therefore be identified with the Minor, except that it does not
admit the leading note.
It should be observed that this mode is to be recognised not merely
in the Perfect System but equally in the primitive octave, of the form
e-e, out of which the Perfect System grew. The important point is the
tonic character of the Mesê (a), and this, as it happens, rests upon
the testimony of an author who knows the primitive octave only. The
fact that that octave is of the so-called Dorian species does not alter
the mode (as we are now using that term), but only the compass of
the notes employed.
The Hypo-dorian octave is seen in two of the scales of the cithara
given by Ptolemy (p. 85), viz. those called tritai and tropoi, and the
Dorian octave (e-e) in two scales, parupatai and ludia. It is very
possible (as was observed in commenting on them) that the two
latter scales were in the key of a, and therefore Hypo-dorian in
respect of mode. The Hypo-dorian mode is also exemplified by three
at least of the instrumental passages given by the Anonymus (supra,
p. 89).
2. The earliest trace of a difference of species appears to be found in
the passage on the subject of the Mixo-lydian mode quoted above (p.
24) from Plutarch's Dialogue on Music. In that mode, according to
Plutarch, it was discovered by a certain Lamprocles of Athens that the
Disjunctive Tone was the highest interval, that is to say, that the
octave in reality consisted of two conjunct tetrachords and a tone:
[Listen]
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