TP131 Fish Passage Guidelines For The Auckland Region 2000 Part A
TP131 Fish Passage Guidelines For The Auckland Region 2000 Part A
guidelines
for the Auckland Region
June 2000
Acknowledgements
Authors1: J. Boubee
E. Williams
J. Richardson
1
National Institute of Water & Atmospheric Research Ltd
CONTENTS
1.0 INTRODUCTION 1
7.0 REFERENCES 56
Executive Summary
The distribution of freshwater fish in the Auckland Region was analysed using data
recorded in the New Zealand Freshwater Fish Database. In total, 15 indigenous and eight
introduced fish species have been recorded in the Auckland Region. The majority of the
indigenous species (13 species) are diadromous and fish migration barriers are therefore
expected to have a major influence on fish distribution in the Auckland Region. Potential
migration barriers like waterfalls, rapids, chutes and debris jams are natural, however the
majority of instream obstructions are anthropogenic. These include badly positioned or
undersized culverts, fords, dams and diversion structures, weirs (including flow
measuring weirs), diversion channels, bed erosion control devices, and stream bed
modifications.
This report provides guidance for the construction and retrofitting of in-stream structures
to allow the upstream passage of fish. Although primarily aimed at road crossing culverts,
solutions for the numerous low head weirs, artificial channels and dams present in the
Auckland Region are also discussed.
As each potential barrier is different, and the species to be catered for are not always the
same, passage solutions will tend to vary from site to site. For culverts four options are
proposed. First, the no-slope (stream slope) design option allows passage of all species,
but requires the installation of a very conservative structure. Second, the stream
simulation design option recreates the natural channel within the culvert barrel and allows
the passage of species present at the site. Third, the hydraulic option is designed using the
velocity and depth requirements of a target fish species.
Finally, the climber design option makes use of the climbing ability of many indigenous
freshwater species (e.g., elvers and koaro) to use the wetted margin to progress upstream.
In terms of design, the climber design option is the least restrictive, but is only useful in
high gradient streams where fish diversity is already limited. With all four options, bed
control devices designed to minimise the risk of erosion are essential and potential
solutions are therefore also discussed.
For barriers other than culverts, only general principles are described and potential
solutions may need to be modified to suit the landscape features, the type of structure
proposed or installed, as well as the habitat and fish species present. Options for low
structures range from traditional designs like the vertical slot fish passes, to natural and
rock-cascade fishways. For dams, fish lifts and/or catch and transfer operations are
proposed. In all cases, it is recommended that only proven designs be used or that expert
advice be sought. Inevitably, even with standard designs, adjustments and repairs will be
required, and a monitoring and maintenance schedule should always be adopted.
1.0 INTRODUCTION
New Zealand possesses a relatively sparse fish fauna, with only 35 or so indigenous
species, at least another 20 introduced, and half a dozen marine wanderers that
periodically enter estuaries and lowland rivers. Of indigenous freshwater species, 18
are diadromous and undergo migrations between fresh and saltwater as a necessary
part of their life cycle.
Apart from degradation of the adult habitats, one of the most significant causes of the
decline in freshwater fish populations in New Zealand is the construction of structures
such as dams and culverts that prevent fish from accessing otherwise suitable habitat.
Management of the numerous freshwater resources has focused on avoiding,
remedying, or mitigating the impacts of contaminants, physical activities and
abstractions. However, these initiatives are irrelevant if the resident aquatic biota do
not have access to the resource.
This report was commissioned by the Auckland Regional Council to provide users
with guidelines for the construction and operation of in-stream structures. As each
potential barrier is different, solutions will also vary. Consequently, only general
principles are described here and these will need to be modified to suit the landscape
features, the type of structure proposed or installed, as well as the habitat and fish
species present. In most cases it is recommended that only proven designs be used or
that expert advice be sought. Inevitably, even with standard designs, adjustments and
repairs will be required, and a monitoring and maintenance schedule should always be
adopted.
The distribution of freshwater fish in the Auckland Region was assessed using data
from the New Zealand Freshwater Fish Database (NZFFD). Approximately three
quarters of the sites were sampled using electric fishing techniques which may have
underestimated the occurrence of some species (e.g,. smelt). On 1 July 1999, the
NZFFD contained 608 records for the Auckland Region dated from 1980 to the
present (Fig. 1). Of these, there were 14 sites with no species present and five with
only freshwater crayfish (Paranephrops planifrons). In total, 15 indigenous and eight
introduced fish species were recorded from the Auckland Region (Table 1). Eels, both
shortfinned and longfinned, were the most abundant species, but banded kokopu and
common bully were also frequently recorded. Redfinned bully, Cran’s bully
(Gobiomorphus basalis) and inanga were found at about 10% of the sites. Apart from
the introduced mosquito fish (Gambusia affinis), all other species were found at less
than 5% of the sites. Other indigenous species that perhaps should be present but have
not been recorded include shortjawed kokopu (Galaxias postvectis), bluegilled bully
(Gobiomorphus hubbsi), and lamprey. Shrimps, which are not recorded in the NZFFD,
are common throughout the region. More information on fish distribution is available
on the NZFFD website at http://fwdb.niwa.cri.nz.
0 20 km
Figure 1: Location of sites within the Auckland Region where freshwater fish information is
available on the New Zealand freshwater fish database.
Table 1: Freshwater fish species recorded on the New Zealand freshwater fish database for the
Auckland Region. The total number of sites dated 1980 to the present that contained
fish was 589. The majority of the information (77%) was collected by electric fishing
which may have underestimated the occurrence of some species (e.g., smelt).
Most of the indigenous fish species that occur in New Zealand’s waterways have a
juvenile migrant stage, therefore their adult populations are dependent on the success
of the annual upstream migrations of juveniles. The migration times of some of the
most important freshwater species found or expected in the Auckland Region are
presented in Table 2. Critical factors considered to be important in the distribution and
spawning success of the various species present in the region are given in Table 3.
In addition to swimming, several indigenous New Zealand fish species have the ability
to climb moist surfaces (Table 5). This climbing ability varies between species (Table
6).
Table 2: Upstream and downstream migration times of some of the most important freshwater
species found in the Auckland Region. ⇑, Upstream migration; ⇓, Downstream
migration. L, Larvae; J, Juvenile or whitebait; A, Adult; S, Spawning adults.
Table 3: Critical habitat requirements for the life functioning and spawning of shrimps and
freshwater fish species present or likely to be present in the Auckland Region.
INDIGENOUS
Shortfinned eel at sea Lowland waterways at sea
Smelt sea or lake lakes and low to midland waterways lower reaches of flowing
waterways ?
Giant kokopu sea or lake/pond lake edges and slow flowing waters mid to low reaches of
with good overhead cover flowing waterways
Banded kokopu sea or lake small streams with good overhead during freshes in adult
cover habitat
Koaro sea or lake/pond bush clad streams with high water during freshes in adult
quality habitat
INTRODUCED
Rainbow and streams high quality water clean gravel with high
brown trout quality water
Mosquito fish adult habitat ponds, lakes and low to midland adult habitat (live bearer)
waterways
Rudd, goldfish, adult habitat ponds, lakes and low to midland adult habitat
koi carp, tench waterways
and perch
Table 4: Swimming speeds, migration rates and velocity preferences of indigenous New
Zealand freshwater fish species, including a comparison with some North American
data for weak and strong swimmers. Sustained speed = the velocity that can be
maintained for long timeframes; Steady speed = the velocity that can be maintained
for minutes; Burst speed = the velocity that can be maintained for seconds. LCF =
length to caudal fork.
Inanga (adult) <0.15 Water velocity which fish select Mitchell and Boubée 1995
and can easily negotiate
Banded kokopu (whitebait) 0.05 Upstream migration gain in the Stancliff et al. 1988
Waikato River
Overseas
Elvers (100 mm) 0.0–0.15 Sustained speed Bell 1986
Table 5: Locomotory classification of some New Zealand freshwater fish species (modified
from Mitchell and Boubée 1989).
Anguilliforms:
These fish are able to worm their way through interstices in Shortfinned and longfinned eels, and
stones or vegetation either in or out of the water. They are to some extent juvenile kokopu and
able to respire atmospheric oxygen if their skin remains koaro. Torrentfish may also fit into this
damp. category, but unlike eels they need to
remain submerged at all times.
Climbers:
These species climb the wetted margins of waterfalls, rapids Lamprey, elvers, juvenile kokopu and
and spillways. They adhere to the substrate using the koaro, shrimp. Juvenile common and
surface tension and can have roughened “sucker like” redfinned bullies to a limited extent.
pectoral and pelvic fins or even a sucking mouth (lamprey).
The freshwater shrimp, a diadromous native crustacean, is
an excellent climber.
Jumpers:
These species are able to leap using the waves at waterfalls Trout, salmon, and possibly (on a
and rapids. As water velocity increases it becomes energy scale of 20–50 mm) smelt, inanga
saving for these fish to jump over the obstacle. and kokopu spp.
Swimmers:
Species that usually swim around obstacles. They rely on Inanga, smelt, grey mullet and
areas of low velocity to rest and reduce lactic acid build-up juvenile bullies.
with intermittent “burst” type anaerobic activity to get past
high velocity areas.
Table 6: Climbing ability (ranked from 1 = poor climber to 4 = good climber) of some common
indigenous fish species found in the Auckland Region. J, Juveniles; A, Adults; S,
Spawning adults.
Species Life 1 2 3 4
stage (poor climbers) (good climbers)
Shortfinned and J 4
Longfinned eels A 4
1
S
Torrentfish J 4
A 4
S1 ?
Banded kokopu and J 4
koaro A ?
S ?
Giant kokopu and bully J 4
spp. (not giant) A ?
S ?
Smelt and inanga J 4
(not dwarf) A 4
S 1 4
Mullet spp. J 4
(and giant bullies ?) A 4
S1 4
1
Species with some or all of the spawning occurring downstream, or at sea. Where climbing ability is shown it is for the
returning adult.
3.3.1 Height
Steepness, constricted flows, and low bed roughness may lead to water velocities that
exceed the swimming capability of fish and so prevent upstream passage. In addition,
uniform conditions of gradient, roughness, and depth can lead to an absence of low
velocity zones where fish can rest and recover after swimming to exhaustion.
Until recently, the expectation has been that building additional roughness into a
channel would improve fish passage. Thus, the use of corrugated pipe or the inclusion
of baffles and weirs has often been recommended to improve fish passage through
culverts. However, increased roughness can also result in levels of turbulence that can
restrict the movements of small fish (Bates and Powers 1998).
Insufficient water depth in channels and culverts often causes passage problems for
the larger swimming species. Aprons at the outlets of culverts can present barriers
during periods of low flows. In New Zealand, many upstream migrating fish species
are small, can spend a considerable amount of time out of water, and have good
climbing ability. Therefore, shallow depth is not necessarily a problem and could even
be exploited as a means of excluding the larger introduced species.
Channel length may be a problem for fish if water velocity restricts the distance they
can travel at any one time to less than the full channel length. Even if the fish can
maintain a stationary position between periods of forward movement, the high-energy
cost involved may mean that they become exhausted before they reach the end.
3.3.5 Light
The effect of light, or the lack of it, on fish migration remains an area of debate both
here in New Zealand and overseas. Darkness is not a barrier for elvers and there is
evidence that banded kokopu can migrate through long dark culverts. Information on
other species is lacking, but observations indicate that many indigenous fish only
require very low light levels in order to migrate. Fish release trials undertaken in
Auckland culverts showed that fish will pass through when light levels are as low as
0.4% of natural light levels.
In order to surmount obstacles, climbing fish species such as elvers and koaro require
a continuous smooth wetted margin. A small break in this wetted margin, water
turbulence and/or wave action can block the upstream passage of the most determined
migrators.
When considering the need to facilitate fish passage, it is essential that the following
points are considered (see also Figure 2):
• Species present and distribution within the catchment. The distribution of fish
will indicate whether migrants pass through a potential barrier site to access
waters higher in the catchment. Knowing which species are present (and thus their
swimming abilities and behaviours) enables potential passage problems to be
identified, and the design to be adjusted accordingly. Furthermore, the barrier may
have allowed a desirable species to develop and the population could be
compromised if passage for other species is eased. The need to contain a noxious
species may also have to be considered.
• The size and type of habitat available up stream. If the habitat is not of the
correct type or extensive enough to support a population of a particular species it
may not be necessary to provide passage. Furthermore, if contaminated sites exist
upstream, allowing passage may have undesirable consequences.
• The timing of fish migrations, duration and their flow requirements . The
timing of migrations can be used to set the flows at which the design will need to
provide passage, and help to schedule construction to minimise disruption to fish
migration. The timing of migration may vary slightly between years and location.
• Altitude and distance from the sea. The few diadromous fish species which are
found at high elevations (> 200 m) have good climbing abilities and can negotiate
sections of river that are impassable to lowland species. Fish passage requirements
at such sites need not be as stringent as at lower elevations. Determining which
species, if any, are present at what densities is therefore essential.
NO
YES
YES
Are there ecological reasons
for not providing passage?
NO
Is there extensive or
NO
significant in-stream habitat
upstream or could there be
with remediation?
YES
NO Is there a significant barrier
between the structure and the
upstream habitat?
YES
NO
Is the barrier man made?
YES
NO
Can it be made passable?
YES
Allow for fish No fish passage required.
passage/provide mitigation Mitigation may be sought.
Figure 2: Flow chart to aid in the assessment of potential in-stream fish barriers.
Several types of barriers were identified in a survey of key catchments within the
Auckland Region (Evans and Glover 1999). Some were natural features such as
waterfalls, rapids, chutes and debris jams (Plates 1 and 2).
The flashy nature of Auckland streams which, combined with prolonged periods of
very low flows, can also severely limit fish passage. The high flows not only require
the installation of very large in-stream structures, but also result in a very high
incidence of bank and streambed erosion. During low flows, although indigenous fish
are well adapted to survive in shaded remnant pools, upstream passage of new recruits
is often limited by water depth.
Plate 1: Waterfall on Okiritoto Stream. Most fish species, except for elvers and climbing
galaxiids (i.e. koaro and banded kokopu), would find such natural structures
impassable. Only climbing species, or species able to form landlocked populations,
need to be considered above such natural structures.
Plate 2: Rapids on Okiritoto Stream. Most fish species, except for poor climbers like mullet,
smelt and inanga, would easily negotiate such features.
EXISTING PROBLEM
Climbing fish species are unable to reach the culvert at low flows, and barrel
velocities are too great at medium and high flows.
Low energy dissipation
Erosion of stream bed capacity due to smooth
Shallow water depth concrete
Overhanging outlet in culvert
Erosion of stream bank above streambed
• Use a large culvert with the invert • Build notched weir(s) downstream
(i.e. the culvert floor) positioned of the outlet to flood the toe of the
below the streambed. culvert (also see Fig. 3, Page 30).
fish passage 17
Guideline and Review for the Auckland Region
Barriers to Fish Passage 18
EXISTING PROBLEM
High water velocities, turbulent flows at outlet, vertical drop at end of outlet apron,
and no wetted margins for climbing species.
EXISTING PROBLEM
High barrel velocities restrict upstream fish passage to low flow periods and to
anguilliform locomotors and climbers only. Some passage possible during floods
when the ford is overtopped.
fish passage 19
Guideline and Review for the Auckland Region