Supporting Web-based Scholarly
Annotation
Anna Gerber
Supporting Web-based Scholarly Annotation
Supporting Web-based Scholarly Annotation
Supporting Web-based Scholarly Annotation
Supporting Web-based Scholarly Annotation
Supporting Web-based Scholarly Annotation
Supporting Web-based Scholarly Annotation
Supporting Web-based Scholarly Annotation
Scholarly Annotation Requirements
• Citable
– Including private annotations
• Precise
• Annotation of segments / regions
• Annotate extensible list of media types e.g. text,
HTML, PDF, raster images, vector images, video,
audio, 3D objects, research data e.g. protein
crystallography models, repositories
• Annotate within dynamic web applications e.g.
maps
Scholarly Annotation Requirements
• Migrate / display annotations across
– Multiple copies of identical resource
– Multiple representations of equivalent resource
• E.g. TEI/XML rendered using different stylesheets to
HTML/PDF, 3D objects at different resolutions
– Multiple versions of resource
• E.g. versions of web page over time, versions within a
scholarly edition, pre-print vs publisher copy of journal
article
• Copyright concerns
Semantic scholarly annotations
• Annotate non-information resources e.g.
identifiers for concepts, database entities
• "Stand-off" annotation to retain integrity of
original resource
• Multiple targets
– Particularly expressing relationship between
targets
• Multiple bodies/ structure content
– E.g. multiple semantic tags + commentary
Implementation concerns
• Our systems use Annotea, OA
– Shared generic backend, custom clients
• Discoverability, sharability between systems
requires agreed protocols & APIs not just
shared model
• Flexibility of model needs to be balanced with
ease of implementation

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Supporting Web-based Scholarly Annotation

  • 9. Scholarly Annotation Requirements • Citable – Including private annotations • Precise • Annotation of segments / regions • Annotate extensible list of media types e.g. text, HTML, PDF, raster images, vector images, video, audio, 3D objects, research data e.g. protein crystallography models, repositories • Annotate within dynamic web applications e.g. maps
  • 10. Scholarly Annotation Requirements • Migrate / display annotations across – Multiple copies of identical resource – Multiple representations of equivalent resource • E.g. TEI/XML rendered using different stylesheets to HTML/PDF, 3D objects at different resolutions – Multiple versions of resource • E.g. versions of web page over time, versions within a scholarly edition, pre-print vs publisher copy of journal article • Copyright concerns
  • 11. Semantic scholarly annotations • Annotate non-information resources e.g. identifiers for concepts, database entities • "Stand-off" annotation to retain integrity of original resource • Multiple targets – Particularly expressing relationship between targets • Multiple bodies/ structure content – E.g. multiple semantic tags + commentary
  • 12. Implementation concerns • Our systems use Annotea, OA – Shared generic backend, custom clients • Discoverability, sharability between systems requires agreed protocols & APIs not just shared model • Flexibility of model needs to be balanced with ease of implementation