Introduction, Review of
Biomolecules
Lecture 1, Medical Biochemistry
Lecture 1 Outline
• Review some basic chemical nomenclature
and concepts
• Review the structural and functional
features of different biomolecules
• Discuss the human genome project and the
future of molecular medicine
Common Functional Groups
Common Condensation
Reactions
Common Enzymatic Conversions
Oxidation-Reduction
Phosphorylation Phosphatase
Terms/Concepts to Review
• Hydrophobicity and hydrophilicity
• Aromatic and aliphatic
• Ionic, or electrostatic, interactions
• Hydrogen bonds
• van der Waals interactions
• Covalent bonds
Major Causes of Disease
(from Table 1.1 in text)
• Physical Agents: mechanical trauma,
temperature extremes, radiation, electric shock
• Chemical Agents: toxic compounds, drugs
• Biologic Agents: viruses, bacteria, fungi,
parasites, biochemistry professors
• Genetic Disease
• Oxygen Lack: loss of blood, decreased
oxygen-carrying capacity of blood,
mitochondrial poisoning
Disease Causes (cont.)
• Immunologic Reactions: anaphylaxis,
autoimmune disorders
• Nutritional Imbalances: deficiencies,
excesses
• Endocrine Imbalances: hormonal
deficiencies/excesses
Two-Way Street: Medicine and
Biochemistry
Sugars/Carbohydrates
Membrane Lipids
Sterols
Fatty Acids
Saturated and Unsaturated
Which Compound Would be
Found in a Membrane?
Nucleic Acids: Components of
RNA and DNA
DNA:
double helix
Adenosine Triphosphate - ATP
Amino Acids:
Protein Building Blocks
Levels of Protein Structure
Human Genome Project
• A rough draft is complete, >90% sequenced
• Represents approximately 75,000 human genes
(estimated range: 30,000 to 120,000)
• Based on the DNA from six individuals; thus provides
little information regarding genetic diversity within the
population
• Estimated that 95% of our DNA content is not
important; represents evolutionary ā€œbaggageā€
• Highlights the need for continued sequencing of
genomes from other organisms to identify essential
genes and their functions
Proteomics
• Proteomics – the study of how all proteins
interact with each other in a cell
• Estimate 50,000 to 2,000,000 human proteins
• The amino acid sequence of a protein can be
determined from the gene sequence, but in most
cases, this cannot be used to predict overall 3D-
structure or function; usually this is done by X-
ray crystallography
• Only about 1% of proteins have had their 3D
structures determined
The Next 40 years in Medicine
• Predictions made by Francis Collins
M.D./Ph.D., director of the National Human
Genome Research Institute
Predictions - 2010
• Primary care providers will practice genetic
medicine
• Preimplantation diagnoses of fertilized
embryos will be widely available
• Gene therapy will be routinely used for a
few conditions
Predictions - 2020
• Gene-based designer drugs will be marketed for
some diseases
• Cancer therapies will target the molecular
fingerprint of each tumor type
• Drug susceptibility will be determined before a
prescription is written
• Genomic intervention via homologous
recombination will be used to insert genes without
interfering with neighboring genes
Predictions - 2030
• Human aging genes will be fully
catalogued; clinical trials designed to
increase life span will be initiated
• Computer models of human cells will be
available for research
• Complete genome sequencing will cost less
than $1,000 per person
Predictions - 2040
• Comprehensive genomics-based healthcare will be
standard.
• Individualized preventive treatments will be
available and effective.
• Gene therapies and gene-based drug therapies will
be available for most diseases.
• Newborn testing for disease pre-disposition in
adulthood will be feasible.
• The average lifespan will reach 90 yrs.

Introduction to Medical Biochemistry

  • 1.
  • 2.
    Lecture 1 Outline •Review some basic chemical nomenclature and concepts • Review the structural and functional features of different biomolecules • Discuss the human genome project and the future of molecular medicine
  • 3.
  • 4.
  • 5.
  • 6.
    Terms/Concepts to Review •Hydrophobicity and hydrophilicity • Aromatic and aliphatic • Ionic, or electrostatic, interactions • Hydrogen bonds • van der Waals interactions • Covalent bonds
  • 7.
    Major Causes ofDisease (from Table 1.1 in text) • Physical Agents: mechanical trauma, temperature extremes, radiation, electric shock • Chemical Agents: toxic compounds, drugs • Biologic Agents: viruses, bacteria, fungi, parasites, biochemistry professors • Genetic Disease • Oxygen Lack: loss of blood, decreased oxygen-carrying capacity of blood, mitochondrial poisoning
  • 8.
    Disease Causes (cont.) •Immunologic Reactions: anaphylaxis, autoimmune disorders • Nutritional Imbalances: deficiencies, excesses • Endocrine Imbalances: hormonal deficiencies/excesses
  • 9.
    Two-Way Street: Medicineand Biochemistry
  • 10.
  • 11.
  • 12.
  • 13.
  • 14.
    Which Compound Wouldbe Found in a Membrane?
  • 15.
  • 16.
  • 17.
  • 18.
  • 19.
  • 20.
    Human Genome Project •A rough draft is complete, >90% sequenced • Represents approximately 75,000 human genes (estimated range: 30,000 to 120,000) • Based on the DNA from six individuals; thus provides little information regarding genetic diversity within the population • Estimated that 95% of our DNA content is not important; represents evolutionary ā€œbaggageā€ • Highlights the need for continued sequencing of genomes from other organisms to identify essential genes and their functions
  • 21.
    Proteomics • Proteomics –the study of how all proteins interact with each other in a cell • Estimate 50,000 to 2,000,000 human proteins • The amino acid sequence of a protein can be determined from the gene sequence, but in most cases, this cannot be used to predict overall 3D- structure or function; usually this is done by X- ray crystallography • Only about 1% of proteins have had their 3D structures determined
  • 22.
    The Next 40years in Medicine • Predictions made by Francis Collins M.D./Ph.D., director of the National Human Genome Research Institute
  • 23.
    Predictions - 2010 •Primary care providers will practice genetic medicine • Preimplantation diagnoses of fertilized embryos will be widely available • Gene therapy will be routinely used for a few conditions
  • 24.
    Predictions - 2020 •Gene-based designer drugs will be marketed for some diseases • Cancer therapies will target the molecular fingerprint of each tumor type • Drug susceptibility will be determined before a prescription is written • Genomic intervention via homologous recombination will be used to insert genes without interfering with neighboring genes
  • 25.
    Predictions - 2030 •Human aging genes will be fully catalogued; clinical trials designed to increase life span will be initiated • Computer models of human cells will be available for research • Complete genome sequencing will cost less than $1,000 per person
  • 26.
    Predictions - 2040 •Comprehensive genomics-based healthcare will be standard. • Individualized preventive treatments will be available and effective. • Gene therapies and gene-based drug therapies will be available for most diseases. • Newborn testing for disease pre-disposition in adulthood will be feasible. • The average lifespan will reach 90 yrs.