Proteobacteria
Prepared by
Dharmesh N. Sherathia
CCSIT, Junagadh(BKNMU)
dharmesh.microbio@gmail.com
Features of
Proteobacteria
 The Proteobacteria are a major group
(phylum) of bacteria
 Include a wide variety of pathogens, such as
Escherichia, Salmonella, Vibrio, Helicobacter,
and many other notable genera
 Proteobacteria are Gram-negative, with an
outer membrane mainly composed of
lipopolysaccharides
 move about using flagella, but some are
nonmotile or rely on bacterial gliding
 The last include the myxobacteria
 many different shapes, to reflect the
enormous diversity of morphologies and
physiologies observed within this bacterial
phylum
 In 2002, the Proteobacteria consist of more
than 460 genera and more than 1600
species, scattered over 5 major
phylogenetic lines of descent known as the
classes
 “Alphaproteobacteria,”
 “Betaproteobacteria,”
 “Gammaproteobacteria,”
 “Deltaproteobacteria”
Habitat
 Organisms that can be found in different
habitats ranging from plant roots
(Rhizobium and Azospirillum) inside the
cells of a host (rickettsias) and as free living
bacteria in the environment such as
Methylobacteriaum species
 Found in virtually any environment across
the globe
 Some of the species in the phyla can
survive extreme environments with very
little to no oxygen.
 Diversity of morphological and
physiological types: besides rods and cocci,
curved, spiral, ring-shaped, appendaged,
filamentous and sheathed bacteria occur
among this phylum
 Most Proteobacteria are
mesophilicphilic,but some thermophilic
(e.g., Thiomonas thermosulfata and
Tepidomonas) and psychrophilic (e.g.,
Polaromonas) representatives have been
described
 A great number of Proteobacteria are
motile by means of polar or peritrichous
flagella, whereas the myxobacteria
(belonging to the “Deltaproteobacteria”)
display a gliding type of motility and show
highly complex developmental lifestyles,
whereby often remarkable multicellular
and macroscopic structures (so-called
“fruiting bodies”) are formed
 Most of the known Proteobacteria are
free-living; some (such as the rhizobia)
enter in symbiotic associations with
specific leguminous plants, where they fix
nitrogen in root or stem nodules
 Others live as intracellular endosymbionts
of protozoa and invertebrates (mussels,
insects and nematodes), whereas the
rickettsiae are obligate intracellular
parasites of humans or mammals
 The extreme diversity of energy generating
mechanisms is a unique biochemical
characteristic of the Proteobacteria: some
are chemoorganotrophs (e.g., Escherichia
coli), others are chemolithotrophs (e.g., the
sulfuroxidizing bacteria such as the
thiobacilli and the ammonia-oxidizing
bacteria such as Nitrosomonas) or
phototrophs (e.g., the purple colored
Chromatium, Rhodospirillum and many
others)
 Concerning their relationship towards
oxygen, the Proteobacteria include strictly
aerobic and anaerobic species as well as
facultative aerobes and microaerophiles
 Denitrifiers are reported among the
“Alphaproteobacteria,”
“Betaproteobacteria,”
“Gammaproteobacteria,” and the
“Epsilonproteobacteria.
Types of organisms
 Purple Phototrophic Bacteria
 Nitrifying Bacteria
 Sulphur and Iron Oxidising Bacteria
 Hydrogen Oxidising Bacteria
 Methanotrophs
 Acetic Acid Bacteria
 Bioluminescent and Related Bacteria
Classification
 1987, Carl Woese established-
ribosomal RNA (rRNA) sequences
 The Proteobacteria are divided into six
sections, referred to by the Greek letters
alpha through zeta
 alpha, beta, delta, epsilon sections are
monophyletic.
 Alphaproteobacteria, Betaproteobacteria,
Gammaproteobacteria,
Deltaproteobacteria, Epsilonproteobacteria
and Zetaproteobacteria
HISTORY
 1987, Carl Woese established this grouping
called it the "purple bacteria and their
relatives“
 great diversity of forms found in this group
 Proteobacteria are named after Proteus
 Greek god of the sea
 Capable of assuming many different
shapes, and it is therefore not named after
the genus Proteus
 Great biological importance, as they
include the majority of the known Gram
negatives of medical, veterinary, industrial
and agricultural interest
 Because they play key roles in the carbon,
sulfur and nitrogen cycles on our planet
e.g rhizobium, green purple sulphur
bacteria
Alpha proteobacteria
 Oligotrophic proteobacteria- those capable of
growing at low nutrient levels
 Some have unusual metabolic modes such as
Methylotrophy (Methylobacterium),
 Chemolithotrophy (Nitrobacter)
 fix nitrogen (Rhizobium)
 Members of genera such as Rickettsia and Brucella
are important pathogens
 Many genera are characterized by distinctive
morphology such as prosthecae
 A prostheca (pl., prosthecae) is an
extension of the cell, including the
plasma membrane and cell wall, that
is narrower than the mature cell
 A stalk is a nonliving appendage
produced by the cell and extending
from it.
 Budding is distinctly different from
the binary fission normally used by
bacteria.
The Purple Non sulfur Bacteria
 Noxygenic photosynthesis, possess
bacteriochlorophylls a or b,
 All purple nonsulfur bacteria are –
proteobacteria (exception Rhodocyclus)
 Trap light energy and employ organic
molecules as both electron and carbon
sources(photoorganoheterotrophs)-
Nonsulfur Bacteria(do not oxidize
elemental sulfur to sulfate)
 During absence of light- devoid colour-
grow like chemoorganotrophs
Representatives of Purple Nonsulfur Bacteria
Figure 15.6
 Prevalent in the mud and water of lakes
and ponds with abundant organic matter
and low sulfide levels
Family: Rhodospirillaceae
 Rhodospirillum and Azospirillum
 Cyst formation is unique feature of this
family
 Cyst is for
1. Protect cell from dessication
2. Less protective against UV and heat
3. Made in response to nutrient limitations
Rickettsia and Coxiella
 These bacteria are rod-shaped, coccoid, or
pleomorphic with typical gram-negative
walls and no flagella.
 Although their size varies, they tend to be
very small. For example, Rickettsia is 0.3 to
0.5 m in diameter and 0.8 to 2.0 m long; .
All species are parasitic or mutualistic.
 The parasitic forms grow in vertebrate
erythrocytes, macrophages , and vascular
endothelial cells.
 Often they also live in blood-sucking
arthropods such as fleas, ticks, mites, or lice,
which serve as vectors or primary hosts.
 This order contains many important
pathogens.
 Rickettsia prowazekii and R. typhi are
associated with typhus fever, and R. rickettsii,
with Rocky Mountain spotted fever.
 Coxiella burnetii causes Q fever in humans.
 Rickettsias are very different from most
other
 They lack glycolytic pathways and do not
use glucose as an energy source, but
rather oxidize glutamate
 The rickettsial plasma membrane has
carrier-mediated transport systems
 host cell nutrients and coenzymes are
absorbed and directly used
The Caulobacteraceae and
Hyphomicrobiaceae
 These bacteria can have at least one of three
different features: a prostheca, a stalk, or
reproduction by budding
 The genus Hyphomicrobium contains
chemoheterotrophic, aerobic, budding bacteria
that frequently attach to solid objects in
freshwater, marine, and terrestrial
environments
 About 0.5 to 1.0 by 1 to 3 m- vegetative cell
size
 Prostheca 0.2 to 0.3 um in diameter, that
grows to several um in length
 Bud is finally released as an oval- to
 pear-shaped swarmer cell,
Hyphomicrobiaceae
 Distinct metabolism -> Sugars and most
amino acids do not support abundant
growth
 https://www.tandfonline.com/doi/pdf/10.1
080/00021369.1982.10865468
 Hyphomicrobium grows on ethanol and
acetate and flourishes with one-carbon
compounds such as methanol, formate,
and formaldehyde
 facultative methylotroph and can derive
both energy and carbon from reduced one
carbon compounds
 Hyphomicrobium may comprise up to 25%
of the total bacterial population in
Caulobacter
 Possess a prostheca and holdfast
 Material secreted at the end of the
Caulobacter holdfast is the strongest biological
adhesion molecule known-superglue
 Freshwater and marine habitats with low
nutrient levels
 Adhere to bacteria, and got nutrient from
them
 Here prostheca contain only cytoplasm of cell
can enlarge 10 time larger than vegetative cells
 Caulobacter can survive in diluted medium by
enlarging their size
Family:Rhizobiaceae
 Order Rhizobiales of the -proteobacteria
contains 11 families
 This includes the family Hyphomicrobiaceae
 Important family in this order is Rhizobiaceae
which includes rhizobium and agrobacterium
 Cells often contain poly—hydroxybutyrate
inclusions. They grow symbiotically within root
nodule cells of legumes as nitrogen-fixing
bacteroids
 Live with leguminous plant symbiotically within
the nodule it fix atmospheric nitrogen
 Agrobacterium is placed in the family
Rhizobiaceae but differs from Rhizobium
 agrobacteria invade the crown, roots, and
stems of many plants and transform plant cells
into autonomously proliferating tumor cells
 Responsible genes are located on plasmid
 best-studied species is A. tumefaciens, which
enters many broad-leaved plants through
wounds and causes crown gall disease
 Presence of a large Ti (for tumor inducing)
plasmid
Nitrifying Bacteria
 Nitrifiers may be rod-shaped, ellipsoidal,
spherical, spirillar or lobate, and they may
possess either polar or peritrichous flagella
 Nitrifying bacteria make important
contributions to the nitrogen cycle
 most of the proteobacteria that are
capable of growth at very low levels of
nutrients
 Some have unusual morphology, including
protrusions such as stalks or buds known
as prosthecae.
 also include agriculturally important
bacteria capable of inducing nitrogen
fixation in symbiosis with plants, and
several plant and human pathogens
List of microbes included in alpha
proteobacteria
Magnetococcus marinus
 ability to form a structure called a
magnetosome
 a membrane encased single-magnetic-
domain mineral crystals formed by
biomineralisation
 allows the cells to orientate along the
Earth’s geomagnetic field
 Magnetotactic bacteria (or MTB) are a
polyphyletic group of bacteria discovered
by Richard P. Blakemore in 1975
 The biological phenomenon of
microorganisms tending to move in
response to the environment's magnetic
characteristics is known as magnetotaxis
 Blakemore realised that these
microorganisms were following the
direction of Earth's magnetic field, from
south to north, and thus coined the term
"magnetotactic“
 The MTBs can be subdivided into two
categories, according to whether they
produce particles of magnetite (Fe3O4) or
of greigite (Fe3S4)
 Many MTB are able to survive only in
environments with very limited oxygen,
and some can exist only in completely
anaerobic environments
 Some types of magnetotactic bacteria can
produce magnetite even
in anaerobic conditions, using nitric
oxide, nitrate, or sulfate as a final acceptor
for electrons. The greigite mineralising
MTBs are usually strictly anaerobic
 It has been suggested MTB evolved in the
early Proterozoic Era
order: Rickettsiales
 Most of those described survive only
as endosymbionts of other cells
 Some are notable pathogens,
including Rickettsia, which causes a
variety of diseases in humans
 Studies support the endosymbiotic
theory according to
which mitochondria and
related organelles developed from
members of this group
 owing largely to difficulties in cultivating
them
 The Rickettsiales has a sister order
the Pelagibacterales
Order: Pelagibacterales
 Alphaproteobacteria composed of free-
living bacteria
 It was first placed in the Rickettsiales, but
was later raised to the rank of order, and
then placed as sister order to
the Rickettsiales
 Pelagibacter ubique and related species
are oligotrophs—scavengers—and feed on
dissolved organic carbon and nitrogen
 They are unable to fix carbon or nitrogen,
but can perform the TCA
cycle with glyoxylate bypass and are able
to synthesise all amino-acids, except
glycine
 It is non-photosynthetic
 Possesses proteorhodopsin (incl. retinol bi
osynthesis) for ATP production from light
Parvularcula bermudensis
 Parvularcula isolates are Gram-negative,
strictly aerobic, chemoheterotrophic,
slightly motile short rods with a
single flagellum.
 Colonies on marine agar are very small
(0·3–0·8 mm in diameter), yellowish-brown
and very hard. They are oxidase positive
and catalase negative.

Proteobacteria

  • 1.
  • 2.
  • 5.
     The Proteobacteriaare a major group (phylum) of bacteria  Include a wide variety of pathogens, such as Escherichia, Salmonella, Vibrio, Helicobacter, and many other notable genera  Proteobacteria are Gram-negative, with an outer membrane mainly composed of lipopolysaccharides  move about using flagella, but some are nonmotile or rely on bacterial gliding  The last include the myxobacteria
  • 6.
     many differentshapes, to reflect the enormous diversity of morphologies and physiologies observed within this bacterial phylum  In 2002, the Proteobacteria consist of more than 460 genera and more than 1600 species, scattered over 5 major phylogenetic lines of descent known as the classes  “Alphaproteobacteria,”  “Betaproteobacteria,”  “Gammaproteobacteria,”  “Deltaproteobacteria”
  • 7.
    Habitat  Organisms thatcan be found in different habitats ranging from plant roots (Rhizobium and Azospirillum) inside the cells of a host (rickettsias) and as free living bacteria in the environment such as Methylobacteriaum species  Found in virtually any environment across the globe  Some of the species in the phyla can survive extreme environments with very little to no oxygen.
  • 8.
     Diversity ofmorphological and physiological types: besides rods and cocci, curved, spiral, ring-shaped, appendaged, filamentous and sheathed bacteria occur among this phylum  Most Proteobacteria are mesophilicphilic,but some thermophilic (e.g., Thiomonas thermosulfata and Tepidomonas) and psychrophilic (e.g., Polaromonas) representatives have been described
  • 9.
     A greatnumber of Proteobacteria are motile by means of polar or peritrichous flagella, whereas the myxobacteria (belonging to the “Deltaproteobacteria”) display a gliding type of motility and show highly complex developmental lifestyles, whereby often remarkable multicellular and macroscopic structures (so-called “fruiting bodies”) are formed
  • 10.
     Most ofthe known Proteobacteria are free-living; some (such as the rhizobia) enter in symbiotic associations with specific leguminous plants, where they fix nitrogen in root or stem nodules  Others live as intracellular endosymbionts of protozoa and invertebrates (mussels, insects and nematodes), whereas the rickettsiae are obligate intracellular parasites of humans or mammals
  • 11.
     The extremediversity of energy generating mechanisms is a unique biochemical characteristic of the Proteobacteria: some are chemoorganotrophs (e.g., Escherichia coli), others are chemolithotrophs (e.g., the sulfuroxidizing bacteria such as the thiobacilli and the ammonia-oxidizing bacteria such as Nitrosomonas) or phototrophs (e.g., the purple colored Chromatium, Rhodospirillum and many others)
  • 12.
     Concerning theirrelationship towards oxygen, the Proteobacteria include strictly aerobic and anaerobic species as well as facultative aerobes and microaerophiles  Denitrifiers are reported among the “Alphaproteobacteria,” “Betaproteobacteria,” “Gammaproteobacteria,” and the “Epsilonproteobacteria.
  • 13.
    Types of organisms Purple Phototrophic Bacteria  Nitrifying Bacteria  Sulphur and Iron Oxidising Bacteria  Hydrogen Oxidising Bacteria  Methanotrophs  Acetic Acid Bacteria  Bioluminescent and Related Bacteria
  • 14.
    Classification  1987, CarlWoese established- ribosomal RNA (rRNA) sequences  The Proteobacteria are divided into six sections, referred to by the Greek letters alpha through zeta  alpha, beta, delta, epsilon sections are monophyletic.  Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Deltaproteobacteria, Epsilonproteobacteria and Zetaproteobacteria
  • 15.
    HISTORY  1987, CarlWoese established this grouping called it the "purple bacteria and their relatives“  great diversity of forms found in this group  Proteobacteria are named after Proteus  Greek god of the sea  Capable of assuming many different shapes, and it is therefore not named after the genus Proteus
  • 16.
     Great biologicalimportance, as they include the majority of the known Gram negatives of medical, veterinary, industrial and agricultural interest  Because they play key roles in the carbon, sulfur and nitrogen cycles on our planet e.g rhizobium, green purple sulphur bacteria
  • 17.
  • 18.
     Oligotrophic proteobacteria-those capable of growing at low nutrient levels  Some have unusual metabolic modes such as Methylotrophy (Methylobacterium),  Chemolithotrophy (Nitrobacter)  fix nitrogen (Rhizobium)  Members of genera such as Rickettsia and Brucella are important pathogens  Many genera are characterized by distinctive morphology such as prosthecae
  • 20.
     A prostheca(pl., prosthecae) is an extension of the cell, including the plasma membrane and cell wall, that is narrower than the mature cell  A stalk is a nonliving appendage produced by the cell and extending from it.  Budding is distinctly different from the binary fission normally used by bacteria.
  • 21.
    The Purple Nonsulfur Bacteria  Noxygenic photosynthesis, possess bacteriochlorophylls a or b,  All purple nonsulfur bacteria are – proteobacteria (exception Rhodocyclus)  Trap light energy and employ organic molecules as both electron and carbon sources(photoorganoheterotrophs)- Nonsulfur Bacteria(do not oxidize elemental sulfur to sulfate)  During absence of light- devoid colour- grow like chemoorganotrophs
  • 23.
    Representatives of PurpleNonsulfur Bacteria Figure 15.6
  • 24.
     Prevalent inthe mud and water of lakes and ponds with abundant organic matter and low sulfide levels
  • 25.
    Family: Rhodospirillaceae  Rhodospirillumand Azospirillum  Cyst formation is unique feature of this family  Cyst is for 1. Protect cell from dessication 2. Less protective against UV and heat 3. Made in response to nutrient limitations
  • 26.
    Rickettsia and Coxiella These bacteria are rod-shaped, coccoid, or pleomorphic with typical gram-negative walls and no flagella.  Although their size varies, they tend to be very small. For example, Rickettsia is 0.3 to 0.5 m in diameter and 0.8 to 2.0 m long; . All species are parasitic or mutualistic.
  • 27.
     The parasiticforms grow in vertebrate erythrocytes, macrophages , and vascular endothelial cells.  Often they also live in blood-sucking arthropods such as fleas, ticks, mites, or lice, which serve as vectors or primary hosts.  This order contains many important pathogens.  Rickettsia prowazekii and R. typhi are associated with typhus fever, and R. rickettsii, with Rocky Mountain spotted fever.  Coxiella burnetii causes Q fever in humans.
  • 28.
     Rickettsias arevery different from most other  They lack glycolytic pathways and do not use glucose as an energy source, but rather oxidize glutamate  The rickettsial plasma membrane has carrier-mediated transport systems  host cell nutrients and coenzymes are absorbed and directly used
  • 31.
    The Caulobacteraceae and Hyphomicrobiaceae These bacteria can have at least one of three different features: a prostheca, a stalk, or reproduction by budding  The genus Hyphomicrobium contains chemoheterotrophic, aerobic, budding bacteria that frequently attach to solid objects in freshwater, marine, and terrestrial environments  About 0.5 to 1.0 by 1 to 3 m- vegetative cell size  Prostheca 0.2 to 0.3 um in diameter, that grows to several um in length
  • 32.
     Bud isfinally released as an oval- to  pear-shaped swarmer cell,
  • 33.
  • 35.
     Distinct metabolism-> Sugars and most amino acids do not support abundant growth  https://www.tandfonline.com/doi/pdf/10.1 080/00021369.1982.10865468  Hyphomicrobium grows on ethanol and acetate and flourishes with one-carbon compounds such as methanol, formate, and formaldehyde  facultative methylotroph and can derive both energy and carbon from reduced one carbon compounds  Hyphomicrobium may comprise up to 25% of the total bacterial population in
  • 36.
    Caulobacter  Possess aprostheca and holdfast  Material secreted at the end of the Caulobacter holdfast is the strongest biological adhesion molecule known-superglue  Freshwater and marine habitats with low nutrient levels  Adhere to bacteria, and got nutrient from them  Here prostheca contain only cytoplasm of cell can enlarge 10 time larger than vegetative cells  Caulobacter can survive in diluted medium by enlarging their size
  • 38.
    Family:Rhizobiaceae  Order Rhizobialesof the -proteobacteria contains 11 families  This includes the family Hyphomicrobiaceae  Important family in this order is Rhizobiaceae which includes rhizobium and agrobacterium  Cells often contain poly—hydroxybutyrate inclusions. They grow symbiotically within root nodule cells of legumes as nitrogen-fixing bacteroids  Live with leguminous plant symbiotically within the nodule it fix atmospheric nitrogen
  • 39.
     Agrobacterium isplaced in the family Rhizobiaceae but differs from Rhizobium  agrobacteria invade the crown, roots, and stems of many plants and transform plant cells into autonomously proliferating tumor cells  Responsible genes are located on plasmid  best-studied species is A. tumefaciens, which enters many broad-leaved plants through wounds and causes crown gall disease  Presence of a large Ti (for tumor inducing) plasmid
  • 40.
    Nitrifying Bacteria  Nitrifiersmay be rod-shaped, ellipsoidal, spherical, spirillar or lobate, and they may possess either polar or peritrichous flagella  Nitrifying bacteria make important contributions to the nitrogen cycle
  • 41.
     most ofthe proteobacteria that are capable of growth at very low levels of nutrients  Some have unusual morphology, including protrusions such as stalks or buds known as prosthecae.  also include agriculturally important bacteria capable of inducing nitrogen fixation in symbiosis with plants, and several plant and human pathogens
  • 42.
    List of microbesincluded in alpha proteobacteria
  • 43.
    Magnetococcus marinus  abilityto form a structure called a magnetosome  a membrane encased single-magnetic- domain mineral crystals formed by biomineralisation  allows the cells to orientate along the Earth’s geomagnetic field
  • 44.
     Magnetotactic bacteria(or MTB) are a polyphyletic group of bacteria discovered by Richard P. Blakemore in 1975  The biological phenomenon of microorganisms tending to move in response to the environment's magnetic characteristics is known as magnetotaxis  Blakemore realised that these microorganisms were following the direction of Earth's magnetic field, from south to north, and thus coined the term "magnetotactic“
  • 45.
     The MTBscan be subdivided into two categories, according to whether they produce particles of magnetite (Fe3O4) or of greigite (Fe3S4)  Many MTB are able to survive only in environments with very limited oxygen, and some can exist only in completely anaerobic environments
  • 46.
     Some typesof magnetotactic bacteria can produce magnetite even in anaerobic conditions, using nitric oxide, nitrate, or sulfate as a final acceptor for electrons. The greigite mineralising MTBs are usually strictly anaerobic  It has been suggested MTB evolved in the early Proterozoic Era
  • 47.
    order: Rickettsiales  Mostof those described survive only as endosymbionts of other cells  Some are notable pathogens, including Rickettsia, which causes a variety of diseases in humans  Studies support the endosymbiotic theory according to which mitochondria and related organelles developed from members of this group
  • 48.
     owing largelyto difficulties in cultivating them  The Rickettsiales has a sister order the Pelagibacterales
  • 49.
    Order: Pelagibacterales  Alphaproteobacteriacomposed of free- living bacteria  It was first placed in the Rickettsiales, but was later raised to the rank of order, and then placed as sister order to the Rickettsiales  Pelagibacter ubique and related species are oligotrophs—scavengers—and feed on dissolved organic carbon and nitrogen
  • 50.
     They areunable to fix carbon or nitrogen, but can perform the TCA cycle with glyoxylate bypass and are able to synthesise all amino-acids, except glycine  It is non-photosynthetic  Possesses proteorhodopsin (incl. retinol bi osynthesis) for ATP production from light
  • 51.
    Parvularcula bermudensis  Parvularculaisolates are Gram-negative, strictly aerobic, chemoheterotrophic, slightly motile short rods with a single flagellum.  Colonies on marine agar are very small (0·3–0·8 mm in diameter), yellowish-brown and very hard. They are oxidase positive and catalase negative.