242 Letters to the Editor
Repeated failed non-invasive prenatal testing
owing to low cell-free fetal DNA fraction and
increased variance in a woman with severe
autoimmune disease
A 41-year-old woman (gravida 2 para 1) with autoim-
mune disease was referred for genetic counseling
following an increased risk of trisomy 21 (1:164) on
combined first-trimester screening. She had a history
of severe autoimmune thrombocytopenia, with past
treatments including splenectomy, steroids, intravenous
immunoglobulin (IVIG) and cyclosporin. She also had
an autoimmune neutropenia, a past history of myasthe-
nia gravis treated with thymectomy and Hashimoto’s
thyroiditis. Her weight was 67 kg.
Given her low platelet count of 36 × 109
/L, the patient
elected to have non-invasive prenatal testing (NIPT) at
15 weeks rather than an amniocentesis for the risk of
trisomy 21. The NIPT did not return a result owing
to a low fetal fraction (< 4%). A repeat NIPT test was
discussed, with the advice that > 50% of women with a
failed assay have a successful result on redraw1
. A repeat
NIPT sample was therefore sent at 17 weeks to the same
provider. This sample also failed because of a fetal fraction
of < 4%.
Owing to the turnaround time for offshore NIPT pro-
cessing, the patient was 19 weeks at the time of the second
failed NIPT. After counseling, the patient decided to pro-
ceed with amniocentesis.
The autoimmune disease in this patient was considered
a likely cause for the persistently low fetal fraction at
15 and 17 weeks. We hypothesized that the steroids and
IVIG used to treat her thrombocytopenia and neutropenia
before the planned amniocentesis might also improve the
fetal fraction by suppressing maternal cell destruction.
With Research Ethics Committee approval, a third
NIPT sample was taken, after 7 days of oral steroids,
at 21 + 0 weeks. Her platelet count improved, from
Copyright © 2014 ISUOG. Published by John Wiley & Sons Ltd. Ultrasound Obstet Gynecol 2014; 44: 241–243.
Letters to the Editor 243
36 × 109
/L to 98 × 109
/L. A fourth NIPT sample was
taken, 2 days later, after an IVIG infusion (1 mg/kg).
The third NIPT sample taken after the steroid course
successfully returned a result of ‘low risk’ for trisomies
21, 18 and 13 (fetal fraction, 4.6%). The fourth NIPT
sample, taken after the IVIG infusion (21 + 2 weeks) did
not return a result owing to ‘unusually high variance in
cell-free DNA counts’. The fetal fraction was not reported.
The final karyotype from the amniocentesis was normal.
The mean fetal fraction at 11–14 weeks is 10%1
;
approximately 2% of women will not receive an NIPT
result because of a low fetal fraction2,3
. The successful
NIPT result after the course of steroids in this patient
suggests that the fetal fraction was increased by immuno-
suppression. However, this increase cannot be confidently
distinguished from a background gestational age-related
increase in fetal fraction, estimated at 0.1% per week3.
The laboratory would not reveal the fetal fractions from
the tests at 15 and 17 weeks.
The high variance in cell-free DNA counts in the
fourth sample, post-IVIG, suggests specific interference
from this therapy. The biological basis of ‘increased vari-
ance’ is still unknown. The multiple NIPT failures in
this patient suggest that caution is advised when counsel-
ing women with severe autoimmune disease about NIPT.
Unfortunately, these patients frequently have conditions
that make avoidance of invasive procedures particularly
desirable.
L. Hui*†‡, M. Bethune§¶, A. Weeks§, J. Kelley† and
L. Hayes†**
†Department of Perinatal Medicine,
Mercy Hospital for Women, Heidelberg, VIC, Australia;
‡Department of Obstetrics & Gynaecology,
University of Melbourne, Parkville, VIC, Australia;
§Specialist Women’s Ultrasound, Box Hill,
VIC, Australia;
¶Department of Medical Imaging,
Mercy Hospital for Women, Heidelberg, VIC, Australia;
**Clinical Haematology Service, Northern Health,
Epping, VIC, Australia
*Correspondence.
(e-mail: lisahui77@gmail.com)
DOI: 10.1002/uog.13418
References
1. Ashoor G, Syngelaki A, Poon LC, Rezende JC, Nicolaides KH.
Fetal fraction in maternal plasma cell-free DNA at 11–13 weeks’
gestation: relation to maternal and fetal characteristics. Ultra-
sound Obstet Gynecol 2013; 41: 26–32.
2. Gil MM, Quezada MS, Bregant B, Ferraro M, Nicolaides KH.
Implementation of maternal blood cell-free DNA testing in early
screening for aneuploidies. Ultrasound Obstet Gynecol 2013; 42:
34–40.
3. Wang E, Batey A, Struble C, Musci T, Song K, Oliphant A.
Gestational age and maternal weight effects on fetal cell-free
DNA in maternal plasma. Prenat Diagn 2013; 33: 662–666.
Copyright © 2014 ISUOG. Published by John Wiley & Sons Ltd. Ultrasound Obstet Gynecol 2014; 44: 241–243.

Repeated failed non-invasive prenatal testing in autoimmune disease owing to low cell-free fetal DNA fraction and increased variance in autoimmune disease

  • 1.
    242 Letters tothe Editor Repeated failed non-invasive prenatal testing owing to low cell-free fetal DNA fraction and increased variance in a woman with severe autoimmune disease A 41-year-old woman (gravida 2 para 1) with autoim- mune disease was referred for genetic counseling following an increased risk of trisomy 21 (1:164) on combined first-trimester screening. She had a history of severe autoimmune thrombocytopenia, with past treatments including splenectomy, steroids, intravenous immunoglobulin (IVIG) and cyclosporin. She also had an autoimmune neutropenia, a past history of myasthe- nia gravis treated with thymectomy and Hashimoto’s thyroiditis. Her weight was 67 kg. Given her low platelet count of 36 × 109 /L, the patient elected to have non-invasive prenatal testing (NIPT) at 15 weeks rather than an amniocentesis for the risk of trisomy 21. The NIPT did not return a result owing to a low fetal fraction (< 4%). A repeat NIPT test was discussed, with the advice that > 50% of women with a failed assay have a successful result on redraw1 . A repeat NIPT sample was therefore sent at 17 weeks to the same provider. This sample also failed because of a fetal fraction of < 4%. Owing to the turnaround time for offshore NIPT pro- cessing, the patient was 19 weeks at the time of the second failed NIPT. After counseling, the patient decided to pro- ceed with amniocentesis. The autoimmune disease in this patient was considered a likely cause for the persistently low fetal fraction at 15 and 17 weeks. We hypothesized that the steroids and IVIG used to treat her thrombocytopenia and neutropenia before the planned amniocentesis might also improve the fetal fraction by suppressing maternal cell destruction. With Research Ethics Committee approval, a third NIPT sample was taken, after 7 days of oral steroids, at 21 + 0 weeks. Her platelet count improved, from Copyright © 2014 ISUOG. Published by John Wiley & Sons Ltd. Ultrasound Obstet Gynecol 2014; 44: 241–243.
  • 2.
    Letters to theEditor 243 36 × 109 /L to 98 × 109 /L. A fourth NIPT sample was taken, 2 days later, after an IVIG infusion (1 mg/kg). The third NIPT sample taken after the steroid course successfully returned a result of ‘low risk’ for trisomies 21, 18 and 13 (fetal fraction, 4.6%). The fourth NIPT sample, taken after the IVIG infusion (21 + 2 weeks) did not return a result owing to ‘unusually high variance in cell-free DNA counts’. The fetal fraction was not reported. The final karyotype from the amniocentesis was normal. The mean fetal fraction at 11–14 weeks is 10%1 ; approximately 2% of women will not receive an NIPT result because of a low fetal fraction2,3 . The successful NIPT result after the course of steroids in this patient suggests that the fetal fraction was increased by immuno- suppression. However, this increase cannot be confidently distinguished from a background gestational age-related increase in fetal fraction, estimated at 0.1% per week3. The laboratory would not reveal the fetal fractions from the tests at 15 and 17 weeks. The high variance in cell-free DNA counts in the fourth sample, post-IVIG, suggests specific interference from this therapy. The biological basis of ‘increased vari- ance’ is still unknown. The multiple NIPT failures in this patient suggest that caution is advised when counsel- ing women with severe autoimmune disease about NIPT. Unfortunately, these patients frequently have conditions that make avoidance of invasive procedures particularly desirable. L. Hui*†‡, M. Bethune§¶, A. Weeks§, J. Kelley† and L. Hayes†** †Department of Perinatal Medicine, Mercy Hospital for Women, Heidelberg, VIC, Australia; ‡Department of Obstetrics & Gynaecology, University of Melbourne, Parkville, VIC, Australia; §Specialist Women’s Ultrasound, Box Hill, VIC, Australia; ¶Department of Medical Imaging, Mercy Hospital for Women, Heidelberg, VIC, Australia; **Clinical Haematology Service, Northern Health, Epping, VIC, Australia *Correspondence. (e-mail: [email protected]) DOI: 10.1002/uog.13418 References 1. Ashoor G, Syngelaki A, Poon LC, Rezende JC, Nicolaides KH. Fetal fraction in maternal plasma cell-free DNA at 11–13 weeks’ gestation: relation to maternal and fetal characteristics. Ultra- sound Obstet Gynecol 2013; 41: 26–32. 2. Gil MM, Quezada MS, Bregant B, Ferraro M, Nicolaides KH. Implementation of maternal blood cell-free DNA testing in early screening for aneuploidies. Ultrasound Obstet Gynecol 2013; 42: 34–40. 3. Wang E, Batey A, Struble C, Musci T, Song K, Oliphant A. Gestational age and maternal weight effects on fetal cell-free DNA in maternal plasma. Prenat Diagn 2013; 33: 662–666. Copyright © 2014 ISUOG. Published by John Wiley & Sons Ltd. Ultrasound Obstet Gynecol 2014; 44: 241–243.