sequenceTools
Safe HaskellNone
LanguageHaskell2010

SequenceTools.Utils

Synopsis

Documentation

versionInfoOpt :: Parser (a -> a) Source #

versionInfoText :: String Source #

sampleWithoutReplacement :: [a] -> Int -> IO (Maybe [a]) Source #

freqSumToEigenstrat :: FreqSumEntry -> (EigenstratSnpEntry, GenoLine) Source #

convert a freqSum entry to an eigenstrat SNP entry

dosageToEigenstratGeno :: Maybe (Int, Int) -> GenoEntry Source #

convert a Dosage to an eigenstrat-encoded genotype

data UserInputException Source #

Constructors

UserInputException String 

Instances

Instances details
Exception UserInputException Source # 
Instance details

Defined in SequenceTools.Utils

Methods

toException :: UserInputException -> SomeException #

fromException :: SomeException -> Maybe UserInputException #

displayException :: UserInputException -> String #

backtraceDesired :: UserInputException -> Bool #

Show UserInputException Source # 
Instance details

Defined in SequenceTools.Utils

Methods

showsPrec :: Int -> UserInputException -> ShowS #

show :: UserInputException -> String #

showList :: [UserInputException] -> ShowS #