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An overview of all nanopack tools

Python 274 18 Updated Jun 2, 2023

Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data

143 30 Updated Jul 23, 2025

Snakemake pipeline for processing ultra-long ONT datasets.

Python 2 Updated Aug 23, 2023

A Variant Call Format reader for Python.

Python 418 199 Updated Sep 22, 2023

A Python package for exploring and analysing genetic variation data

Jupyter Notebook 307 55 Updated Jan 1, 2026

A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM or BAM file.

Python 195 47 Updated Jan 1, 2026
TeX 382 327 Updated Sep 9, 2024

This is the full REST API for CUFE-Classroom application. This project aims to build a web service that facilitates the communication between teachers and students.

JavaScript 7 Updated Sep 9, 2022