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1. earth-metabolome-initiative/metrin-kg earth-metabolome-initiative/metrin-kg Public

   Pipeline for generating the knowledge graph integrating emi, trydb, globi datasets.

   Python

2. earth_metabolome_ontology earth_metabolome_ontology Public

   Forked from earth-metabolome-initiative/earth_metabolome_ontology

   Earth Metabolome Semantic Model.

   Python

3. sparql-examples sparql-examples Public

   Forked from sib-swiss/sparql-examples

   A set of SPARQL examples that are used in different SIB resources

   HTML

4. contextAwareTaxMatch contextAwareTaxMatch Public

   Initial repo to match taxonomy given the context (relations) between two organisms

   Python

5. epigeneticsMining epigeneticsMining Public

   Initial steps to mine information on epigenetics data (e.g.: accession nos in ENA, flow cell information for ONT, etc.; not variants)

   Python

6. ontology-mutations ontology-mutations Public

   Initial repo for building ontology for mutations (specific to microbes) including re-purposing of other ontologies

   JavaScript