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Research Software Graph

Graphing the dependencies (and dependents) of research software and their contributors.

Current Status

Work in progress.

Completed:

  • Created dataset from JOSS API (~2100 papers with their repository URL)
  • Implemented functions to get the upstream dependencies from any GitHub Repository using the GitHub SBOM
  • Cached the results of the above function to the repository. Can be loaded with: rs_graph.data.load_one_hop_joss_deps
    • Short results for ONE HOP dependencies (the dependencies of the repository itself, not the recursive dependencies)
      • 5,719 unique npm packages (~30,000 total dependency relations)
      • 2,853 unique PyPI packages (~21,000 total dependency relations)
      • 704 unique cargo packages (~2,000 total dependency relations)
      • 489 unique maven packages (~800 total dependency relations)
      • 452 unique actions packages (~7,000 total dependency relations)
      • 358 unique rubygems packages (~800 total dependency relations)
      • 138 unique composer packages (~150 total dependency relations)
      • 118 unique go packages (~150 total dependency relations)
      • 82 unique nuget packages (~100 total dependency relations)
    • NOTE: R / CRAN is not supported by GitHub SBOM
    • I think we should filter down to npm, PyPI, and cargo for now
  • Visualize the dependency graph for intermediate results
  • Write wrappers around different registry APIs to return the source code repository URL for a given package name
  • Write recursive logic to get the entire dependency graph for a given repository

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