Self-hosted collaborative plant management and tracking system for plant enthusiasts

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair

A demonstration of how to work with metadata in Nextflow

nf-test utility functions

An nf-test plugin for reading the contents of SAM/BAM/CRAM files in assertions

MycoSNP: Whole Genome Sequencing Analysis of Fungal Isolates

A Nextflow plugin to estimate the CO₂ footprint of pipeline runs.

Nextflow runs monitoring and organisation UI

A flexible pipeline for complete analysis of bacterial genomes

Polaris is a music streaming application, designed to let you enjoy your music collection from any computer or mobile device.

Params validation plugin for Nextflow pipelines

Aggregate results from bioinformatics analyses across many samples into a single report.

Nextflow training material

High accuracy RAG for answering questions from scientific documents with citations

This repository hosts a large collection of Nextflow snippets

A user-friendly workflow for phylogenomics

Simple test framework for Nextflow pipelines

A DSL for data-driven computational pipelines

lakeFS - Data version control for your data lake | Git for data

NBIS/Elixir course: Tools for Reproducible Research

World's fastest and most advanced password recovery utility

A list of cool features of Git and GitHub.

Linux, Jenkins, AWS, SRE, Prometheus, Docker, Python, Ansible, Git, Kubernetes, Terraform, OpenStack, SQL, NoSQL, Azure, GCP, DNS, Elastic, Network, Virtualization. DevOps Interview Questions

ALL IN ONE Hacking Tool For Hackers

A collection of PDF command line tools and wrappers for Linux

A collection of modern/faster/saner alternatives to common unix commands.

A collection of unexpected challenges and learnings with nextflow and nf-core.

Bioinformatics Tools

Repository to host tool-specific module files for the Nextflow DSL2 community!