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GFF and GVF specification documents

218 90 Updated Jun 18, 2024

Filter a set of reads using Burkhard-Keller trees built from pangenome alleles

Go 3 Updated Dec 17, 2025

Embedding-based indexing for compact storage and rapid querying of bacterial pan-genomes

Jupyter Notebook 20 Updated Dec 9, 2025
Go 11 Updated Dec 16, 2025

Simple succinct data structures (in Rust)

Rust 53 8 Updated Dec 26, 2025

Linux 平台下基于 Rust + GTK 开发的网易云音乐播放器

Rust 2,163 104 Updated Dec 22, 2025

Bitpacked sequence trait and implementation

Rust 16 3 Updated Dec 3, 2025

A minimal copy fastq and fasta reader built for parallel support and paired end processing

Rust 39 3 Updated Dec 16, 2025
Rust 11 Updated Dec 18, 2025

Statistical computation library for Rust

Rust 765 103 Updated Jan 1, 2026

Rust implementation of ntHash rolling‑hash suite, focused on contiguous k‑mer hashing for DNA sequences.

Rust 7 1 Updated Aug 5, 2025
Rust 18 1 Updated Dec 9, 2025

Build phylogenomic datasets in seconds.

Rust 11 Updated Dec 10, 2025

cross-platform Rust API for memory mapped IO

Rust 585 100 Updated Oct 22, 2025

A drop-in replacement for Rust's std::io::BufReader, with extra features

Rust 4 1 Updated Nov 3, 2025

Counting occurrences of a given byte or UTF-8 characters in a slice of memory – fast

Rust 231 28 Updated Jun 3, 2025

Ultra-rapid detection of viral variants directly from sequencing data

Rust 27 Updated Dec 15, 2025

A small, auxiliary index to massively improve parallel fastq parsing

C++ 29 Updated Dec 8, 2025

Recipes for avoiding bounds checks in Rust, without unsafe!

Rust 132 5 Updated Jan 17, 2023

FASTA and FASTQ parsing in Rust

Rust 80 11 Updated Mar 14, 2025

Python and Rust library for loading, saving, and manipulating taxonomic trees

Rust 49 2 Updated Dec 15, 2025

Learn and Practice the Rust programming language the effective way.

Rust 1,182 53 Updated Dec 24, 2025
Rust 12 Updated Nov 22, 2025

Ensure NEON or AVX2 is available during compilation.

Rust 8 1 Updated Nov 21, 2025

Comfortably monitor your Internet traffic 🕵️‍♂️

Rust 32,289 1,175 Updated Jan 5, 2026

Rust Atomics and Locks (中文翻译)

SCSS 317 42 Updated Mar 2, 2025

《Effective Go》中英双语版

2,406 325 Updated Jul 9, 2024

Code for Command-Line Rust (O'Reilly, 2024, ISBN 9781098109417)

Rust 1,917 303 Updated Aug 6, 2024

Vector graphics in Go

Go 1,755 117 Updated Dec 24, 2025
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