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library-prep-plate-prep Public
Find optimal sequencing library plate arrangements
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kerr_mean_field_paper_2021 Public
Forked from lkerr34/kerr_mean_field_paper_2021Mathematica UpdatedApr 22, 2024 -
public-cancer-db Public
Build a DuckDB database for publicly available cancer data
SQL UpdatedMar 15, 2024 -
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pypath Public
Forked from saezlab/pypathPython module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.
Python GNU General Public License v3.0 UpdatedFeb 27, 2024 -
popgen-notes Public
Forked from cooplab/popgen-notesPopulation genetics notes
PostScript MIT License UpdatedFeb 27, 2024 -
OpenOmics Public
Forked from JonnyTran/OpenOmicsA bioinformatics API and web-app to integrate multi-omics datasets & interface with public databases.
Python MIT License UpdatedFeb 27, 2024 -
pyrty Public
Use R snippets as python functions. Manage R dependencies separately.
Python MIT License UpdatedFeb 27, 2024 -
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ratio_corr_gammas Public
Scipy implementation of the ratio of correlated gammas distribution
Python MIT License UpdatedJan 2, 2024 -
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EpigeneticRegulators_MouseGastrulation Public
Forked from HeleneKretzmer/EpigeneticRegulators_MouseGastrulationEpigenetic regulator function through mouse gastrulation
Shell GNU General Public License v3.0 UpdatedJun 20, 2023 -
TLS Public
Forked from HeleneKretzmer/TLSMouse embryonic stem cells self-organize into trunk-like structures with neural tube and somites
Python GNU General Public License v3.0 UpdatedJun 20, 2023 -
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yaglm Public
Forked from statistical-python/yaglmA python package for penalized generalized linear models that supports fitting and model selection for structured, adaptive and non-convex penalties.
Python MIT License UpdatedFeb 2, 2023 -
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Mann-Kendall-Trend Public
Forked from mps9506/Mann-Kendall-TrendSimple python function to run Mann-Kendall Test for Trend
Python MIT License UpdatedNov 6, 2019 -
fraserhead Public
Fraser lab slackbot for onboarding new lab members.
Python GNU General Public License v3.0 UpdatedAug 16, 2019 -
thePrecisionLasso Public
Forked from HaohanWang/thePrecisionLassoimplementation for the Precision Lasso
Jupyter Notebook UpdatedJun 29, 2019 -
SAME Public
Forked from Sun-lab/SAMESomatic mutation Association test with Measurement Errors
R GNU General Public License v3.0 UpdatedMay 9, 2019 -
RCK Public
Forked from aganezov/RCKRCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes
Python MIT License UpdatedFeb 26, 2019 -
plaac Public
Forked from whitehead/plaacPrion-Like Amino Acid Composition
Java MIT License UpdatedOct 2, 2018 -
xenaPython Public
Forked from ucscXena/xenaPythonPython API for Xena Hub
Python Apache License 2.0 UpdatedSep 13, 2018 -
pyNBS Public
Forked from idekerlab/pyNBSPython 2.7 implementation of network-based stratification (NBS) algorithm from Hofree et al (Nature Methods 2013)
Jupyter Notebook MIT License UpdatedSep 5, 2018
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