Best Medical Accounting Software

Compare the Top Medical Accounting Software as of January 2026

What is Medical Accounting Software?

Medical accounting software is a type of software designed to help medical professionals track the financial aspects of their business. It can be used to manage accounts receivable, accounts payable, payroll, and invoicing. Many programs offer features such as customizable reporting, data export capabilities and integration with other business systems. Medical accounting software can save time by automating administrative tasks allowing medical professionals to focus on patient care. Compare and read user reviews of the best Medical Accounting software currently available using the table below. This list is updated regularly.

  • 1
    Sage Intacct

    Sage Intacct

    Sage Intacct

    Sage Intacct supports medical practices and healthcare providers with specialized accounting functionality tailored to the complexities of the industry. It helps manage multi-entity finances across clinics, departments, or specialties within one platform. The system automates billing, insurance claims, and collections while integrating with electronic health records (EHR) for seamless financial and clinical data flow. Real-time dashboards provide insights into patient revenue, payer performance, and operational costs. Sage Intacct supports compliance with healthcare regulations such as HIPAA and GAAP through audit trails and secure access controls. The platform facilitates accurate budgeting and expense management specific to medical services. Integration with payroll and procurement helps streamline administrative operations. Overall, it enables medical organizations to improve financial health and operational efficiency.
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  • 2
    Xero

    Xero

    Xero

    Xero's cloud-based accounting software streamlines your hospital's financial management, from automated invoicing to easy compliance tracking. With intuitive tools and seamless app integrations, it empowers your team to work smarter, not harder.
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    Starting Price: $20/month
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  • 3
    Striven

    Striven

    Miles IT

    Striven is the all-in-one business management software that lowers your costs, improves your operations, and makes work easier. Make your company’s data coherent, connected, and relevant. With over two decades of expertise in Software Services, we’ve collaborated to help over 8,600 organizations in dozens of industries make their operations more secure, efficient, and valuable to their customers. Helping people accomplish more has always been our mission. Now, it’s the heart of our software. We offer simple, straightforward pricing plans and an unbeatable guarantee. You can even get started right now at absolutely no cost. There’s no trial, expiration date, or contractual obligation on any of our plans.
    Starting Price: $35/month per user
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  • 4
    NolaPro

    NolaPro

    Noguska

    NolaPro is a robust, Linux-based ERP for Accounting, Order Tracking, Inventory Management & Payroll, designed to rival much more expensive choices. It is fully customizable and scalable for any size business, unlike any accounting program available today. The Cloud version allows a "hands-off" approach, but can be downloaded on Linux or Windows platforms for those who prefer to have local control and security. Features include: Credit Card Processing, Fulfillment & Service Order, AP, AR, Inventory, CRM, General Ledger, Payroll, Timeclock, Client Payment Portal and integration with many 3rd party apps -- or request your own! NolaPro is multi-lingual, supports multi-currency, offers tons of options & add-ons, and comes fully loaded with over 150 standard reports. A+ reviews from TechRepublic, The Linux Journal, Entrepreneur Magazine and CNet agree that NolaPro provides flexibility, features and pricing which provide you unparalleled value in managing your business.
    Starting Price: $0
  • 5
    NetSuite

    NetSuite

    Oracle

    Oracle NetSuite is the world’s leading AI-powered cloud ERP, trusted by more than 42,000 customers worldwide. The platform unifies ERP, financials, CRM, ecommerce, and analytics into one suite, creating a single source of truth for organizations. Its built-in AI doesn’t just predict—it learns from your business data to deliver accurate insights, recommendations, and automation. With NetSuite, companies can streamline accounting, manage global operations, improve customer relationships, and optimize HR processes all from a centralized cloud platform. Its omnichannel commerce tools also help businesses scale by connecting online, offline, and B2B sales seamlessly. By combining scalability, real-time visibility, and AI-driven intelligence, NetSuite empowers organizations to operate smarter and grow faster.
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    QuickBooks Online
    QuickBooks Online is the most popular accounting software in the world. QuickBooks Online makes accounting easy. Make tracking receipts, income, bank transactions, and more feel simple with the #1 small business accounting software. Snap photos of your receipts and link them to expenses right from your phone. Our agents are ready and available to answer all your QuickBooks questions. Use the apps you know and love to keep your business running smoothly. QuickBooks Online works on your PC, Mac, tablets, and phones. Click the link above to get a 30 day free trial and 50% off your first 3 months. More than accounting software. QuickBooks helps you track income, expenses, and stay ready for taxes. Customers find on average $3,534 in tax savings per year. Need more help? QuickBooks Live helps you stay organized and be ready for tax time. QuickBooks comes with a mobile app that help you run your business on the go—anytime, anywhere.
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    Starting Price: $9/month (normally $15/month)
  • 7
    Accounting Xpert

    Accounting Xpert

    Micronetics

    The Accounting Xpert Enterprise Edition - Client Write-up sets the standard for write-up software in the market today. Easy-to-use, fast, efficient, and well documented, including on-line tutorials, Xpert is a complete integrated system consisting of Write-up, Bank Reconciliation, ATF Payroll and the W2 /1099 Laser Module. Xpert can accommodate virtually any type of client and satisfy the needs of any size practice. Xpert's Client Write-up software provides standard client write-up features as well as many advanced features including no monthly closings, edit any transaction at any time with full audit control, re-run any report at anytime for any date range, including multiple years, print to PDF files, automatically email or fax any report, interface with external products including Microsoft Word for Compilation letters and Excel for charting and graphics, export data to tax programs, import data from external programs including QuickBooks, and many, many more features.
    Starting Price: $1495.00/one-time/user
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    FINSYNC

    FINSYNC

    FINSYNC

    FINSYNC’s mission is to help small to midsize businesses grow and succeed with innovative software and unmatched service. Our payments platform helps businesses centralize control of payments, and our complete solution for payments, invoicing, bill pay, payroll, accounting, financing, cash flow management and services helps businesses grow in new and empowering ways. We deliver unmatched service through a virtual community of specialists who share our commitment to helping entrepreneurs succeed. Get matched with a financial professional that’s best positioned to help you grow for unrivaled support with bookkeeping, accounting, human capital management, financial analysis and corporate strategy. Businesses that use FINSYNC benefit from improved operational efficiency, lower operating costs, better analytics, better service and quicker access to lower-cost capital delivered through the FINSYNC Lending Network.
    Starting Price: $10.00/month
  • 9
    Beacon Accounting

    Beacon Accounting

    Beacon Systems

    Monitor & manage your business in the cloud. Use a world class all-in-one cloud software to handle your accounting, billing, inventory, production and payroll. Financial statements are interpreted and presented in an easy to understand dashboard to the boss. It's not just simple for staff to use, the accountant's module makes it possible for complex and power users to perform their needed functions. With unlimited users, you only pay a fixed price per company. It's no wonder that more than 1,000 companies are already using Beacon. We constantly monitor feedback from users and produce necessary tutorial contents to cater for as many situations as possible. All users are able to login concurrently and collaborate smoothly. Being efficient and getting things done is priority in your business. Automated backups will put you at ease of mind on the hard disk crash / virus attacks / recoveries. You'll also save on your IT maintenance.
    Starting Price: $20 per month
  • 10
    MYOB AccountRight
    Powerful accounting and business management software. Handle invoices, expenses and payroll – plus inventory, multi-currency and detailed job tracking. AccountRight software for PCs keeps you on track and in control. Notify the ATO and help prepare monthly ATO declarations. Be in the know with automatic exchange rates, manual rate comparisons, and easily linked foreign bank accounts. Keep an eye on how much time and money you're spending and how it stacks up against your plans and profits. Spot best sellers and poor performers ahead of time with advanced and intuitive inventory management features. Customize and send professional-looking invoices and quotes. Send invoices and quotes from any device. Set automated invoice reminders. Track invoices to know when they've been seen, opened and paid. Let your customers see all unpaid invoices at once. Get paid through invoices with AMEX, Visa, Mastercard and BPAY. Cashflow updates as soon as you've been paid.
    Starting Price: $35 per month
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    ActivityHD

    ActivityHD

    AccountingWare

    Founded in 1977, AccountingWare is a software development firm serving the accounting community. Throughout the prevailing IT architectures, changes in accounting standards, and ever-increasing governmental reporting requirements, we remain committed to our clients’ needs by providing rock-solid software and world-class support. AccountingWare is the developer of ActivityHD, a flexible and comprehensive ERP system allowing the sophisticated accounting department to manage the enterprise. ActivityHD includes ActivGL, ActivAP, ActivPO, ActivAR, ActivBR, ActivPR, and ActivFA.
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