Compare the Top Payroll Software in Japan as of February 2026

What is Payroll Software in Japan?

Payroll software helps businesses automate the payment of salaries and wages to their employees. It is used to calculate and process payroll payments, manage employee information, and generate reports. It is a convenient and efficient way to ensure that employees are paid on time and accurately. Payroll software typically includes features for generating paychecks, direct deposit, tax filings, generating year-end tax forms (such as W-2s), and maintaining accurate payroll records. Additionally, many payroll software solutions integrate with time-tracking systems, HR management tools, and accounting software to simplify overall business operations and ensure accuracy in payroll processing. Compare and read user reviews of the best Payroll software in Japan currently available using the table below. This list is updated regularly.

  • 1
    Xero

    Xero

    Xero

    Xero's payroll software, with its Gusto integration, makes payroll simple for small businesses. Automatically calculate taxes, file payroll taxes, and pay employees with ease, ensuring compliance with federal, state, and local regulations. Xero integrates directly with your account, syncing payroll data for accurate bookkeeping. With features like next-day direct deposit and automated filings, Xero streamlines payroll, saving you time and reducing administrative tasks.
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    Starting Price: $20/month
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  • 2
    Hubstaff

    Hubstaff

    Hubstaff

    Hubstaff is a time tracking software that helps teams log hours, monitor productivity, and automate payments — whether remote, hybrid, in-office, or field-based. Available on desktop, web, and mobile, Hubstaff enables employees to track time against specific tasks and projects from anywhere. Managers get built-in visibility through app and URL usage data, activity rates, and optional screenshots — all configurable by user role. Designed for global, growing and distributed teams, Hubstaff includes built-in productivity monitoring and workforce analytics to help businesses analyze how time is spent, identify inefficiencies, and improve performance — without micromanagement.
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    Starting Price: $4.99/user/month
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  • 3
    QuickBooks Online
    QuickBooks Online is the most popular accounting software in the world. QuickBooks Online makes accounting easy. Make tracking receipts, income, bank transactions, and more feel simple with the #1 small business accounting software. Snap photos of your receipts and link them to expenses right from your phone. Our agents are ready and available to answer all your QuickBooks questions. Use the apps you know and love to keep your business running smoothly. QuickBooks Online works on your PC, Mac, tablets, and phones. Click the link above to get a 30 day free trial and 50% off your first 3 months. More than accounting software. QuickBooks helps you track income, expenses, and stay ready for taxes. Customers find on average $3,534 in tax savings per year. Need more help? QuickBooks Live helps you stay organized and be ready for tax time. QuickBooks comes with a mobile app that help you run your business on the go—anytime, anywhere.
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    Starting Price: $9/month (normally $15/month)
  • 4
    Twenty20 Construction Cloud

    Twenty20 Construction Cloud

    Hindsight Technologies

    Twenty20 is the first full-featured ERP solution for contractors of all sizes that is 100% customizable to your specific needs. Twenty20 is Easy to learn, Easy to setup, and Easy to use. Modules include: -Accounting - Project Management - Document Management - Estimating - Scheduling - Service Management and Work Order Management - Equipment & Fleet Management Management - Human Resource Management - Leave Management - Time and Attendance Tracking - Expense Report Management - Sales and CRM Our ideal customer: is a contractor that has multiple systems to manage their business and looking for ONE complete solution that is fully integrated and customizable to their needs and requirements.
    Starting Price: $350.00/month
  • 5
    inOut

    inOut

    Novaders LLP

    Time and Attendance management mobile app with Face Recognition & Geo Fencing Easy to use cloud based Time and Attendance management mobile app with Face Recognition & Geo Fencing technology. Simplify payroll and reporting. Advantages of inOut: Compliance Management Manage compliance of employees to office timings and rules without manual intervention. Get real-time alerts and analytics on location. Automation Reduce time & effort of manual leave, Time and Attendance tracking and improve productivity Real-time Live Dashboard & Report Get Leave, Time & Attendance data in simple Dashboard, Reports and Alerts. Employee Health & Safety Improve Health & Safety of employees through a Zero Contact Solution
    Starting Price: $2.00/month/user
  • 6
    Fourth

    Fourth

    Fourth

    Win with talent, operate with excellence, and deliver on your brand promise. With over 20 years of industry-leading technology and services expertise, Fourth is uniquely positioned to reduce the time it takes to create compliant and on-budget schedules, deliver accurate payroll, and keep employees engaged with your brand so you can offer a great guest experience. Fourth offers a suite of mobile and modern back-office solutions that enable operators to monitor performance, predict demand, and control costs and compliance in every area of their operation. Through a suite of services and software, Fourth reduces the administrative burden, risks, and costs that come with managing HR and payroll in-house so you can spend more time building a successful business.
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